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Information for unigene UN54501
| FASTA Sequence |
| Unigene ID: UN54501 | Length: 788 |
SSR | | GGACACCAACCGACGGCTATGGCAACCATTTTCAGATTCTCACTCGGTCTACTCCCGGTTTCCGCCGCCTTGACATGTTGCTCAAT
CCGGTTCCCCGTTTCAAGACCCGCTTCGTTGAACCGTAATCTGTATCATTTATCTTCTTCTTCTTCTTCTTCTTTGAAGACCAAAG
CAGGTTGGTTACTGGGCCTCGGGGACAACAAGAAAAAGAAAGTGGATATACCGGATATCGTGGCAGCTGGAGATCCGGTTCTCCAC
GAAAAGGCCCGAGAAGTCGACCCTGAAGAAATCGGGTCGGAGCGTATTCAGAAGATAATTGATGATATGGTTAAAGTAATGAGATT
GGCTCCTGGAGTTTGGCCTTTGCTGCTCCTCAGATTGGTGTCCCCCTTAAGAATCATTTGTTCTTGGAGATACAAAAGAGTATATC
AGTTACGCACCAAAGGAGGAGACTTTTGCTCAAGACAGACGTCCCCTTTTGATCTTATGGTAATGGGTGAATCCCGGAGCTTAAAA
GCGAGTAGCGACAAGAAAGCTCTCTTCTTTGAAGGATGTGTGAGTGTTGATGGATTCAGAGCTGTGGGTGGAGAGGCACCTTGAAG
TGGTAGTGACAGGCTACGATCGTCAAGGGAAATGGGATGGAAGTGAATGCTTCGGGCTGGCAAGCGAGGATTTTGCAGCATGAGTG
TGATCATTTGGATGGTTATCTTTAAGTTGATAAGATGATACCACGCACTTTTAGGACAGTCGATAACTTGGAATTGCCTCTAGCCG
AAGACTGTCCTAAA
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002890102 hypothetical protein ARALYDRAFT_334826 [Arabidopsis lyrata subsp. lyrata] | 569 | 2e-056 |
| NP_563974 peptide deformylase 1A [Arabidopsis thaliana] | 559 | 2e-055 |
| AAD39667 Simalar to gi|4377403 Polypeptide Deformylase from Chlamydia pneumoniae genome gb|AE001687 [Arabidopsis thaliana] | 549 | 4e-054 |
| BAJ53237 JHL06P13.18 [Jatropha curcas] | 373 | 9e-034 |
| XP_002517604 polypeptide deformylase, putative [Ricinus communis] | 369 | 3e-033 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q9FV53 Peptide deformylase 1A, chloroplastic | 549 | 2e-055 |
| Q9FUZ0 Peptide deformylase 1A, chloroplastic | 306 | 2e-027 |
| B6RGY0 Peptide deformylase 1A, chloroplastic | 231 | 1e-018 |
| Q7NJV3 Peptide deformylase 1 | 141 | 3e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RV35 Polypeptide deformylase, putative | 369 | 2e-033 |
| B9GKW9 Peptide deformylase | 367 | 3e-033 |
| B7FJE4 Putative uncharacterized protein | 319 | 1e-027 |
| Q2HVV8 Formylmethionine deformylase | 255 | 3e-020 |
| A9NQN9 Putative uncharacterized protein | 252 | 7e-020 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G15390.1 PDF1A (PEPTIDE DEFORMYLASE 1A); peptide deformylase | 559 | 1e-057 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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