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Information for unigene UN54512

FASTA Sequence
Unigene ID: UN54512Length: 807 SSR 
GCACACTTTCTCTCTCTAAAGCTCTCTTCGTTTTTATCTCTTCCTATTCGGGTTTCAGATCCGAGTTCGGAAGATTACAAACTACT
CGAAAGTCTTTCACTTTTGCTCTTAAAGCTCTCACCTCTCTCTCTCCGACACAACTCGAAACTCAAGTCATGGCAGGATCAGCACC
AGAAGGTACACAGTTTGATACTCGTCAGTTTGACCAGAAGCTCAATGATGTCCTCGAGGGACAAGATGAGTTCTTCACCTCGTATG
ATGAGGTCCATGAGAGCTTTGATGCCATGGGTCTTCAAGAGAACCTTCTTAGGGGTATCTATGCCTATGGTTTTGAGAAGCCCTCT
GCTATTCAGCAAAGAGGGATCGTACCTTTTTGCAACGGTCTCGATGTGATCCAGCAGGCTCAGTCTGGAACCGGCAAAACCGCCAC
TTTCTGCTCTGGTGTCTTGCAGCAGCTCGACTTCACCCTCGTCCAGTGCCAGGCTCGTGGTATCGATGTGCAGCAAGTGTCTCTGG
TCATCAACTTTGACTTGCCGACTCAGCCTGAGAACTACCTTCACCGTATCGGTAGAAGTGGGAGGTTTGGGAGGAAAGGTGTGGCG
ATTAACTTTGTGACCAAGGATGATGAGAGGATGCTTTTTGATATCCAGAAGTTCTACAATGTTGTTGTTGAGGAGCTTCCATCAAA
CGTAGCCGATCTTCTTTGAAGAAAGAAGAAGAAAGGAAAGGTTGCTTGGTTTGCAAGTTTCTTATTTGATTTTTGACCTATCTCTC
TCTCTCTTTCTGAATTATCTCGAGACCAGTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884997 predicted protein [Arabidopsis lyrata subsp. lyrata]5566e-055
XP_002891805 predicted protein [Arabidopsis lyrata subsp. lyrata]5541e-054
NP_566469 translational initiation factor 4A-1 [Arabidopsis thaliana]5522e-054
NP_001030693 translational initiation factor 4A-1 [Arabidopsis thaliana]5522e-054
AAM63951 Eukaryotic initiation factor 4A, putative [Arabidopsis thaliana]5522e-054

Swiss-Prot top hits (Blast detail)Scoree value
P41376 Eukaryotic initiation factor 4A-15528e-056
P41377 Eukaryotic initiation factor 4A-25482e-055
P41379 Eukaryotic initiation factor 4A-24901e-048
P41382 Eukaryotic initiation factor 4A-104811e-047
Q40465 Eukaryotic initiation factor 4A-114811e-047

TrEMBL top hits (Blast detail)Scoree value
C0Z2Q9 AT3G13920 protein5521e-054
Q2V3W0 Putative uncharacterized protein At3g13920.25521e-054
C6TJ25 Putative uncharacterized protein4822e-046
A9PD17 Predicted protein4793e-046
Q8VWS9 Putative DEAD/DEAH box helicase (Fragment)4784e-046

Arabidopsis top hits (Blast detail)Scoree value
AT3G13920.1 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor5527e-057
AT3G13920.2 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor5527e-057
AT1G54270.1 EIF4A-2; ATP-dependent helicase/ translation initiation factor5482e-056
AT1G72730.1 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative4514e-045
AT3G13920.3 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor4415e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members