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Information for unigene UN54513

FASTA Sequence
Unigene ID: UN54513Length: 635 SSR 
GCAGATATCTTCACAGCGGAAAGAAATTGAGAAAGCTATGGGGAACAAATCAGTTGAAGATCTGTTGCGTGAGCAGATTCAAAATA
AAGACTATTACAAAGGTGGCAACACTCCTCCACGAGGAGGGGGAAGAGGAGGAGGAGGAGGGTCAGGTGGTGGAAACGGTGGATCT
CAAGGCTCATCAGGAGAAGATGGGGGTCTTCCTGGTATAGCACAAAACTCTACAAGTGGTTTTAGCAACCATGGGCTTCATCTTTC
TGTACATCTTCCTCATCAATGGGGAAGAGTTGTTCCGTCTTGCGAGAGATTACTTTAGGTATCTTACTGGACGACCGAAGAGTAAT
AGGCTGACCAGAGTAACGGAAAGTTGGAGTAGATTATTGGAGCGTGTGTCGCCGAGGCAAAAAGTGTATGACGAGTACTTGCTGGA
GAAGCCGATCATCAATACGCCTAGCTGGTATGAGAGCCCTGAGAAATACAGACGTGTCGTGAAGTCTTATACTGATGCAAATGAGG
ATGAGGAATAGCTTTCTTTTTCTGAGTTAGTTTCACACCTACACCATGAACCGTTTTGTTTTAGTTTCATCATAGTTATACAACAA
TCAGATTTTGTATTAAAATAACAAACGCTCCGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850396 uncharacterized protein [Arabidopsis thaliana]3772e-034
AAB64043 unknown protein [Arabidopsis thaliana]3772e-034
XP_002880056 hypothetical protein ARALYDRAFT_483474 [Arabidopsis lyrata subsp. lyrata]3736e-034
XP_002530565 conserved hypothetical protein [Ricinus communis]2742e-022
XP_002876515 glycine-rich protein [Arabidopsis lyrata subsp. lyrata]2714e-022

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O22840 Putative uncharacterized protein At2g436303771e-034
Q8VYY8 Putative uncharacterized protein At2g436303771e-034
B9SX46 Putative uncharacterized protein2741e-022
Q9M1A4 Putative uncharacterized protein At3g596402678e-022
C6TN27 Putative uncharacterized protein2623e-021

Arabidopsis top hits (Blast detail)Scoree value
AT2G43630.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 48 Blast hits to 48 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 0; Plants - 32; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink).3779e-037
AT3G59640.1 glycine-rich protein2675e-024
AT3G59640.2 glycine-rich protein2675e-024
AT3G22800.1 leucine-rich repeat family protein / extensin family protein1171e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members