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Information for unigene UN54557
| FASTA Sequence |
| Unigene ID: UN54557 | Length: 790 |
SSR | | GGGACCGTCGCCGTCATTTGCACCCCCGTTCTCTCTCTCTCTCCGGCATGTATGTTGTTGATGATCCGTTTGGTAGGTCTGATTAT
AATATAACACAGGAGGCTGTGTTTGTTGTTGCCATGTTTCTCACGCGGTTTTTCGGGAGGAGATTCTTGGCTGTGGCTGCATCGAC
GAGATCGGAGTCAACTACTGCAGCAGCAGCAGCTGCCTCGACTGCTAGGATTGCCAAGAACCCTCTCGAAGAGTTCTTCGAGTTCG
ATAGAAGCCAGGAAGAAGACAAACCTGTTGTCTACGGACGAGGATGGAAAGCTTCGGAACTGAGGCCCAAATCATGGGATGATCTT
CAGAAGCTGTGGTACGTTCTTCTCAAAGAGAAGAACATGTTGATGACTCAGCGTCAGATGCTTCAAGCTCAGAACATGATGTTTCC
TAACCCTGAACGTATTCCTAAGGTGAGGAGATCAATGTGCCGCATAAAGCATGTCCTGACAGAGAGAGCTATTGAAGAACCGGATC
CCAGAAGATCTGCCGAGATGAAGAGAATGGTCAATGCTATGTGATCTTCTTGTGCTTCTCTTATCAACCAAGCAATGAATTTGAGT
CAATTCGCATTTGGGATTTTGAAGTAACAAATAAAGCATTCTCAAGAAGCTGGAGAAGACGTTATGGTCTCTAATTAATGGTTTGT
GCGTCTCTTATTAGAAAAATGTTGGTCAGTAGCTATATGCACTGTTTCTGTAAAAACCATGTTGGTGTAATTTTGTCAGTTAATTC
AGAGCTTTGTCTTCGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172261 ribosomal protein L29 family protein [Arabidopsis thaliana] | 643 | 4e-065 |
| XP_002889667 ribosomal protein L29 family protein [Arabidopsis lyrata subsp. lyrata] | 640 | 1e-064 |
| XP_002320251 predicted protein [Populus trichocarpa] | 568 | 2e-056 |
| XP_002283452 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] | 561 | 1e-055 |
| ACU20571 unknown [Glycine max] | 557 | 4e-055 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8K2Y7 39S ribosomal protein L47, mitochondrial | 196 | 1e-014 |
| Q08DT6 39S ribosomal protein L47, mitochondrial | 194 | 2e-014 |
| Q9HD33 39S ribosomal protein L47, mitochondrial | 191 | 5e-014 |
| Q2H080 54S ribosomal protein L4, mitochondrial | 161 | 2e-010 |
| A1C6F8 54S ribosomal protein L4, mitochondrial | 156 | 6e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94JQ7 At1g07830/F24B9_7 | 643 | 3e-065 |
| A9PBH0 Predicted protein | 568 | 2e-056 |
| C6TFG9 Putative uncharacterized protein | 557 | 3e-055 |
| C6T0Z6 Putative uncharacterized protein | 550 | 2e-054 |
| B3TLS2 Structural constituent of ribosome | 542 | 2e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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