Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN54562

FASTA Sequence
Unigene ID: UN54562Length: 599 SSR 
GGTTGAAACTGTGGAGTACAAGAACATTAGCTTCACCGTGTGGGATGTCGGGGGTCAGGACAAGATCCGTCCATTGTGGAGACACT
ACTTCCAGAACACTCAGGGTCTTATCTTTGTTGTTGACAGCAACGATCGTGACCGTGTTGTTGAAGCCAGGGACGAGCTTCACAGG
ATGCTCAACGAGGATGAGTTGAGGGATGCAGTTCTTCTTGTTTTTGCTAACAAGCAAGATCTTCCCAACGCTATGAACGCTGCTGA
GATTACTGACAAGCTTGGCCTTCACTCTCTCCGCCAACGTCACTGGTACATTCAGAGCACATGTGCCACCTCTGGAGAAGGTCTCT
ACGAGGGACTTGACTGGCTCTCCAACAACATTGCTAACAAGGCATAGAAAGGAGGTTGCAAGATTCCTCCTTGCTTCTCAATCAAG
GAAGGCATCTGTTTCGCTAGTACTATAAAAAACGAAACCAAGATTTTATTATCATATGTTCTTCTTCTTCTTCATCTCGCATCTGA
AACTCAAAATCATATCACATTTTGTACTTTCCTTTAATAACTCAGATCGGTTACTTTCGGATATTAATATCGTTTAAATTTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002302788 predicted protein [Populus trichocarpa]6844e-070
AAF65512 ADP-ribosylation factor [Capsicum annuum]6844e-070
NP_191788 ADP-ribosylation factor A1E [Arabidopsis thaliana]6844e-070
ACJ85464 unknown [Medicago truncatula]6844e-070
ABR17508 unknown [Picea sitchensis]6844e-070

Swiss-Prot top hits (Blast detail)Scoree value
P51823 ADP-ribosylation factor 26806e-071
P36397 ADP-ribosylation factor 16798e-071
Q9SRC3 ADP-ribosylation factor 26781e-070
Q06396 ADP-ribosylation factor 16752e-070
O48920 ADP-ribosylation factor6752e-070

TrEMBL top hits (Blast detail)Scoree value
A1YN05 ADP-ribosylation factor-like protein6843e-070
A9P9U3 Predicted protein6843e-070
B7FI12 Putative uncharacterized protein6843e-070
B7FL30 Putative uncharacterized protein6843e-070
B8LPC8 Putative uncharacterized protein6843e-070

Arabidopsis top hits (Blast detail)Scoree value
AT3G62290.1 ATARFA1E (ADP-ribosylation factor A1E); GTP binding / phospholipase activator/ protein binding6852e-072
AT1G10630.1 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F); GTP binding / copper ion binding / phospholipase activator/ protein binding6806e-072
AT2G47170.1 ARF1A1C; GTP binding / phospholipase activator/ protein binding6806e-072
AT1G70490.1 ARFA1D; GTP binding / phospholipase activator/ protein binding6798e-072
AT1G23490.1 ATARF1 (ADP-RIBOSYLATION FACTOR 1); GTP binding / phospholipase activator/ protein binding6798e-072

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members