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Information for unigene UN54577
| FASTA Sequence |
| Unigene ID: UN54577 | Length: 777 |
SSR | | GACTTTCCCTGTGATATGTATTATTATCTGTACTAATACTACTACTATTTACTTAGGAGTAGTGTGTGTAATATCATTGTTCTGCA
GGATCTACAAGCAAAAAGCCCTCTCTATTTTCACTGTCTTCAATGCAGTGACTCTATTTCTCTCTCTCTCTCTTTACCCACAACTC
TTTGTTAGCTTCAAAACCTTCTCTTCTCTCTTCCATTCTCTCTCTCTCACAGAGCAACAAGCTGCATCCAAATCCTGTGCTTAGCT
CTGGTGCAACACTATGGCTGTCGTTGTTCTTGCTGTGATTTTGTTGGCTATGGTTGGTCACTCAAGTGGGACATGGTGTGTATGCA
GAGAAGGATTAAACGAAGCAATGCTGCAGAAGACACTAGACTACGCATGTGGTGCAGGAGCTGACTGTGGACCCATTCACCAGTGA
CGACAACACCATCGACAAGAGTCCCTACGACAACAAATACAAGACCCTACACAGTCACACCTCCAACAGGAGGAGGTTTGGGGATT
CCAGCTGGTGGTTTCAACCCAGACTACACAGATCCATCCTATTCCTTTGGATCCAAACTCCAGAACCCAAGAGCTCTACCACTTTA
TTTTTTATCTGGATTCTTCTACTTGTTGATCTAGTAGTAGACAACAACAACTAAGTTGGACTGTGGATCATGTGAATGTGGGTCTC
TCTCTCTCTCACTAATGGAATCTTTTGAGAGATAGACTTGTTTTGTTCAACCTTGTCTGTTATTTTCCCTAGCTGTTATCCACTTG
GCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002893006 hypothetical protein ARALYDRAFT_889285 [Arabidopsis lyrata subsp. lyrata] | 270 | 8e-022 |
| NP_564059 plasmodesmata callose-binding protein 3 [Arabidopsis thaliana] | 254 | 5e-020 |
| XP_002284112 PREDICTED: hypothetical protein [Vitis vinifera] | 228 | 6e-017 |
| XP_002866419 hypothetical protein ARALYDRAFT_919353 [Arabidopsis lyrata subsp. lyrata] | 192 | 8e-013 |
| AAM64809 unknown [Arabidopsis thaliana] | 191 | 1e-012 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FNQ2 Glucan endo-1,3-beta-glucosidase-like protein 2 | 186 | 2e-013 |
| Q9SD84 Glucan endo-1,3-beta-glucosidase-like protein 3 | 186 | 2e-013 |
| Q93V72 Glucan endo-1,3-beta-glucosidase-like protein At1g69295 | 125 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FZ86 At1g18650 | 254 | 4e-020 |
| B9REF0 Hydrolase, hydrolyzing O-glycosyl compounds, putative | 182 | 9e-012 |
| B9HXJ8 Predicted protein | 177 | 3e-011 |
| C6TG21 Putative uncharacterized protein | 175 | 6e-011 |
| C6SXT0 Putative uncharacterized protein (Fragment) | 170 | 2e-010 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G18650.1 PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3); callose binding / polysaccharide binding | 254 | 2e-022 |
| AT5G08000.1 E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3); callose binding / polysaccharide binding | 186 | 2e-014 |
| AT5G61130.1 PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1); callose binding / polysaccharide binding | 186 | 2e-014 |
| AT1G13830.1 beta-1,3-glucanase-related | 142 | 2e-009 |
| AT2G03505.1 glycosyl hydrolase family protein 17 | 142 | 2e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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