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Information for unigene UN54579
| FASTA Sequence |
| Unigene ID: UN54579 | Length: 677 |
SSR | | GGATCTCTCTTTCACTTTGAAAACCTTTCTCTCTCTCTCCGGTTTGACCCGATTAAGTTCTCCACCAGAGACGCACCAATCTCTCT
CTCTCTTCGTAGATCTGTTTCGTTTCTTGACGTCATCATCTGAGATCGGAGCCTCTCGTTCTCAGATCCATTCGATTTCTATGCTC
TACTCAATCACGACAACCTCCTCGAGGAATTCGCCCTAATCCGTGAGATCGTCGACACGTTCACCTACATCGCCATGGACACGGAG
TTCCCCGGAGTCGTCCTCAAGTCCGTCGAAACCTTCAAACACAACAGCGACCTCAACTACCGCACCCTCAAGGAGAACGTCGACCT
CCTCAAACTCATCCAAGTCGGCCTCACCTTCTCCGACGCCGACGGAAACCTCCCCACCCCCGCACCCGACGGCAAGCCCTGCGTCT
GGCAGTTCAACTTCCGCGAGTTCGACATCGGGGAAGACATCTACGCCAGCGAGTCCATCGAGCTCCTCCGCCAGTGCGGGATCGAT
TTCAAGAAGAACGTCGAGAGAGGGATCGACGTGGCTCGGTTCGGTGAGCTCATGATGTCTTCCGGGATCGTGCTGAACGATTCCAT
CTCGTGGGTGACGTTCCATGGCGGTTACGATTTCGGTTATTTGGTGAAGCTGCTGACGTGTAAAGAGCTGTCGAT
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| GenBank top hits (Blast detail) | Score | e value |
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| AAK92792 putative CCR4-associated factor [Arabidopsis thaliana] | 737 | 4e-076 |
| NP_196657 putative CCR4-associated factor 1-10 [Arabidopsis thaliana] | 737 | 4e-076 |
| XP_002871445 hypothetical protein ARALYDRAFT_487926 [Arabidopsis lyrata subsp. lyrata] | 737 | 4e-076 |
| NP_565735 putative CCR4-associated factor 1-7 [Arabidopsis thaliana] | 593 | 2e-059 |
| XP_002881215 hypothetical protein ARALYDRAFT_902256 [Arabidopsis lyrata subsp. lyrata] | 587 | 1e-058 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q9LEU4 Probable CCR4-associated factor 1 homolog 10 | 737 | 2e-077 |
| Q9SKZ2 Probable CCR4-associated factor 1 homolog 7 | 593 | 1e-060 |
| Q9SAI2 Probable CCR4-associated factor 1 homolog 6 | 567 | 1e-057 |
| Q9S9P2 Probable CCR4-associated factor 1 homolog 2 | 495 | 2e-049 |
| Q9LXM2 Probable CCR4-associated factor 1 homolog 9 | 474 | 6e-047 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B7FJ18 Putative uncharacterized protein | 657 | 5e-067 |
| B9RNX3 Ccr4-associated factor, putative | 653 | 2e-066 |
| B9IL41 Predicted protein | 649 | 5e-066 |
| B7FJG2 Putative uncharacterized protein | 648 | 6e-066 |
| B9HAV1 Predicted protein | 633 | 3e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G10960.1 CCR4-NOT transcription complex protein, putative | 737 | 2e-078 |
| AT2G32070.1 CCR4-NOT transcription complex protein, putative | 593 | 9e-062 |
| AT1G80780.1 CCR4-NOT transcription complex protein, putative | 567 | 1e-058 |
| AT1G80780.2 CCR4-NOT transcription complex protein, putative | 567 | 1e-058 |
| AT1G15920.2 CCR4-NOT transcription complex protein, putative | 495 | 2e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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