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Information for unigene UN54580

FASTA Sequence
Unigene ID: UN54580Length: 730 SSR 
GAGACATGTGTCTGAAGAGAGTCCAGTCCGGCTCTTTAGGATCTCAACATGCATAACTTGATGGTCTGATGAATGGTGTGGGTAAG
TAGAGAGAGAGAGAGAGAGAGGATTTGGATGTTTTGCTGCCCATTTATGTGGAAATCCGGAGGAGAAGATTTGCAAGGTTTCTATC
CTGTTCGACCTGAATGTCAATCTGATGTTCCCAGGACCCGCTTCAAATCAAGGGCTGGAAAGACTCTGAGTGCTAGAAGATGGCAC
GCTGCCTTTACTGAAGATGGCCATTTGGATATGGAAAAAGTTCTCAGACGTATTCAGCGTGGAGGTATTCATCCCTCCATCAAAGG
CGCTGTTTGGGAGTTTTTGTCTGGTTGCTACGATCCCGACAGCACTTTCGATGAAAGGACCAAGCTTAGGGATCTTAGAAGGGAGC
AGTACGGTTCATGGAAAGAAGAATGTAAGAATATGGTTCCTGTCGTTGGTAGCGGCAAGTACATCACAATGGCTGTCGTTTCCGAA
AATGGGCAACCCATAGAAGACTCCTCTGTTGAAAATCAAGGATGGATCGTCAAACACGCTGTCACTGACGACAGAGTCCTCCAATG
GATGCTCTCACTGCATCAGATCGGCCTTGACGTTGCTAGAACTGATCGGTATCTTTCCTTTTATGAGAATGATATCAATCAATCAA
ACTATGGGATGTTCTTGCCATATATACTTGGTTGATCTTGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886279 RabGAP/TBC domain-containing protein [Arabidopsis lyrata subsp. lyrata]9392e-099
NP_179634 RabGAP/TBC domain-containing protein [Arabidopsis thaliana]9373e-099
XP_002869494 RabGAP/TBC domain-containing protein [Arabidopsis lyrata subsp. lyrata]8568e-090
NP_194584 RabGAP/TBC domain-containing protein [Arabidopsis thaliana]8461e-088
XP_002529839 conserved hypothetical protein [Ricinus communis]6847e-070

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
A1L4V1 At4g285508468e-089
B9SV20 Putative uncharacterized protein6845e-070
B9H8Q5 Predicted protein5261e-051
B7FK65 Putative uncharacterized protein (Fragment)4856e-047
B4FMY4 Putative uncharacterized protein4669e-045

Arabidopsis top hits (Blast detail)Scoree value
AT2G20440.1 RabGAP/TBC domain-containing protein9371e-101
AT2G20440.2 RabGAP/TBC domain-containing protein9371e-101
AT4G28550.1 RabGAP/TBC domain-containing protein8465e-091
AT4G27100.1 RAB GTPase activator4631e-046
AT4G27100.2 RAB GTPase activator4631e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  100%

Unigene Members