 |
Information for unigene UN54581
| FASTA Sequence |
| Unigene ID: UN54581 | Length: 530 |
SSR | | GGAAACCAAAACAATAAAAATAAACCAACGTAAAAGCGTTGGTAGAGAAAAGGCAAATCACAATGAAATCTTCTTCAAGGATGGGG
TCTTCATCCCATCTCATCTACGCTCTAGGTGTGATCATCATGGCAACAATGGTTGCTGCTTATGAACCAGTGACATTGCCACCACT
CCCATCATACTCACCATCTCCAAAGGTAGAATACAACGCTCCTCCCCTACCATACATTAACAATTCTCCACCACCACCAACATACT
ATTCTCCATCCCCAGAAGTTGATTAAATCTCCACCACCACCTTATATCTACAATTCTCCACCACCACCACCATATTATTCACCATC
ACTAATGAGTGATGAGGCTCATGCTCATGCTCATGCATTCGTACGTTGTTATTATTTAATTAAATGAAACATGATAATTAATTACA
ATAAAAATGATATATAGCAATCGTGAATGTTTGTTTCTATTAGTTGTCACTTGTATTGTAATGCTATTTTCATGTTATGCTATGGT
TGGTTTCAAGTTTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002877113 predicted protein [Arabidopsis lyrata subsp. lyrata] | 179 | 1e-011 |
| ABD65126 Extensin-like region containing protein [Brassica oleracea] | 177 | 2e-011 |
| NP_193075 Proline-rich extensin-like family protein [Arabidopsis thaliana] | 176 | 2e-011 |
| NP_173784 Proline-rich extensin-like family protein [Arabidopsis thaliana] | 174 | 4e-011 |
| ABD65124 extensin, putative [Brassica oleracea] | 174 | 4e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2A9D1 Extensin-like region containing protein | 177 | 1e-011 |
| Q9T0L0 Extensin-like protein | 176 | 2e-011 |
| Q2A9D3 Extensin, putative | 174 | 3e-011 |
| Q9ZUC3 F5O8.27 protein | 174 | 3e-011 |
| Q2A9D2 Extensin-like region containing protein | 169 | 1e-010 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G13390.1 proline-rich extensin-like family protein | 176 | 1e-013 |
| AT1G23720.1 proline-rich extensin-like family protein | 174 | 2e-013 |
| AT5G35190.1 proline-rich extensin-like family protein | 163 | 4e-012 |
| AT3G54580.1 proline-rich extensin-like family protein | 159 | 1e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
| Unigene Members | |
 |
|
|
