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Information for unigene UN54794
| FASTA Sequence |
| Unigene ID: UN54794 | Length: 611 |
SSR | | TAAGGATTATTAGTACTAAGCAGAGTTGTTGTTCTTGGGACCTTGAAGCTCCATTGGGGAATTGGCGATGCTACCCACAGATCCAT
GCGTCTGAGAACTTAGCTGCGGGCTCGCTGGACAAGCCTCGAGGTTGCTTGTGCTCATGGGGTGCTGCATCGTACCCGAGCTTATC
TGAGGACTCATAGGGGTTCTTTGGTTCATTTGCTGGGGACTCATTGGAGTTCTTTGGTTCATTTGCTGGGGACTCATCGGAGTTCT
CTGGCTCATTTGCTGGGGACTGGACTGTTGTAGCTGCTGCTGTGTAATTCCACCTGATGGGGAGCTTACTTGGGGTGGTGATAGCA
CTGACTGAAGAGGGGAGGCTGTTGACTGTTGCTGCTGCTGTGGTTGTTGAGGCAGCTCATGTTGTTGTAGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGAGACTGAGTTGGCTGCTGTAATTGTTGCTGATGCTGCAACTGTTGCTGTTGGGGTTGCTGCTGCTGCTG
CTGGAGTTGCTGTTGATTCATGTAAGGATTCATTCCAGGCATCAGCTTAGGTGGGCCCATGTTACCCATAGCTCGCTGCAGGTTAG
CTCGGTTTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAG52583 unknown protein; 66073-62011 [Arabidopsis thaliana] | 547 | 3e-054 |
| NP_177383 uncharacterized protein [Arabidopsis thaliana] | 547 | 3e-054 |
| XP_002887433 hypothetical protein ARALYDRAFT_316204 [Arabidopsis lyrata subsp. lyrata] | 522 | 3e-051 |
| XP_002272317 PREDICTED: hypothetical protein [Vitis vinifera] | 504 | 3e-049 |
| XP_002529195 DNA binding protein, putative [Ricinus communis] | 352 | 1e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q86AF2 Putative uncharacterized protein DDB_G0271606 | 259 | 4e-022 |
| Q54WV0 Nuclear transcription factor Y subunit beta | 250 | 5e-021 |
| Q54UW4 Bromodomain-containing protein DDB_G0280777 | 246 | 1e-020 |
| Q55F68 Adenylate cyclase, terminal-differentiation specific | 242 | 4e-020 |
| Q552X2 Putative mediator of RNA polymerase II transcription subunit 26 | 237 | 2e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C9D7 Putative uncharacterized protein T10D10.14 | 547 | 2e-054 |
| B9ST76 DNA binding protein, putative | 371 | 6e-034 |
| B9GVQ4 Predicted protein | 297 | 2e-025 |
| B9GVQ5 Predicted protein | 293 | 7e-025 |
| Q54XA8 Putative uncharacterized protein | 253 | 3e-020 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G72390.1 unknown protein | 754 | 2e-080 |
| AT1G25540.1 PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator | 209 | 3e-017 |
| AT1G25540.2 PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator | 209 | 3e-017 |
| AT4G32551.1 LUG (LEUNIG); protein binding / protein heterodimerization/ transcription repressor | 195 | 1e-015 |
| AT1G30330.1 ARF6 (AUXIN RESPONSE FACTOR 6); transcription factor | 163 | 6e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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