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Information for unigene UN54811

FASTA Sequence
Unigene ID: UN54811Length: 733 SSR 
GAAGGCTGCTGCTAAAAAGGATAGCAGTAGTGATGAATCCGACTCTGATGAATCCGATGAGGAAGAAACCCCAAAGAAGAAGAACG
CTGATGTAGAGACGGTGGTCGCTTTGGCCATGTTGAGTTTGCTACTGCTGAAGCTGCACAGAAGGCATTGCAACTCCACGGTAAGC
CCTTGCTTGGTCGTGATATTCGTCTTGATGTTGCTGCTGAGAGGGGAGACAGACCCGCATACACTCCACAAAGCGGTAACGGTGGT
GGTAACTTCAGAAGCGGTGGTGGTGGTGGTGGTGACGGTCAAAAGATTTTCGTTAAGGGATTCGATGCGTCTCTTGCTGAGGATGA
TATCAGGCATGCATTGACTGAACATTTTACTTCATGTGGAGAGATCACAAGGGTCTCTGTTCCCATGGACCGTGAAACTGGTTCTT
CCAAAGGAATTGCTTTCATTGACTTTAAAGAAGCCGCAGAGAAGGCGTTTGACCTTAATGGTACTGAAGCGGCAGGAGGGTATCTC
GTTGTTGACGAGTCCAAACCGAGGGATCATACAGCAAACCTAGTTTTTCAGGCACGAAGACTACCTTTGACGATTAGAAGCCTTAT
GGAGAAGAGAATGTGTTCTCAAGTCCTTTAGCCGTTTGATGCTATGCTTGTTTTTATTATTTTAGTTTTTTTTCTACTCGAGTCAG
TGTCTGAATCCTTATATTTTTGTCTGAATTTAAATTAAAACTCAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891463 hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp. lyrata]5135e-050
NP_175322 nucleolin [Arabidopsis thaliana]5037e-049
XP_002467108 hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]4042e-037
XP_002307174 predicted protein [Populus trichocarpa]4033e-037
NP_001061178 Os08g0192900 [Oryza sativa Japonica Group]4023e-037

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FVQ1 NuM1 protein, putative5035e-049
C5WZC1 Putative uncharacterized protein Sb01g0197104041e-037
B9H5S7 Predicted protein4032e-037
A2YS16 Putative uncharacterized protein4022e-037
Q68Q07 Putative nucleolin4022e-037

Arabidopsis top hits (Blast detail)Scoree value
AT1G48920.1 ATNUC-L1; nucleic acid binding / nucleotide binding5033e-051
AT3G18610.1 ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding3725e-036
AT1G72800.1 nuM1-related2004e-016
AT5G03480.1 nucleic acid binding / nucleotide binding1574e-011
AT5G51730.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding (TAIR:AT3G18610.1); Has 68 Blast hits to 54 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).1467e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members