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Information for unigene UN54813

FASTA Sequence
Unigene ID: UN54813Length: 712 SSR 
GTCATAATTTACACTCCAAGACAAATAAACGTCGGAGCTCAGTTTTAGCTACCCGACAACCCGAAACCTCTCCCTCTTTATTTTTC
TTTGGTTTTTTTTGAAATTAGTTTTCGGCCGTTGTCATTTTTAATCTGCTTCTCTTCAGGTAGAAAATAATCTGTTAGAGATTTCT
GGGGATTTTTATTTTTTGTTTTGGATATTTTTAAGCAGTGAGTTTTAAAGCTTCGCGAGAGAGAGGGAGAGAGAGAGAGTAGGAGC
TTTTGTGTCAGAATCAGATTCGATATCCGCACGAAGAAGAAGACGACGACATTTCAGGCTTAGACACAGAAGACAGGACGAACCCC
ACTCGTGCCCGGGGACGGAGATAGACTAAACCTTAAAAGCAGAGCTGCTAACGATAATCTTAAATCAGATTCGCAGTTATCGAAAC
GAAAGGGCTGAAAAGGCAAGAGAACACAAACAGAGGCAAAGATGTTCACTTGCATAGCTTGTACCAAAGCAGACGGAGGTGAGGAA
GTCGGAGCGCATGGAAGCACCACTCCCAATACTAAAGAAGCCGTCAAAAGCCTAACCACACAGATCAAAGATATGGCTATGAAATT
CTCTGGTGCTTATAAACAATGTAAGCCATGCACTGGTTCCACTACCAGCCCCATGAAGAAAGTAAATAGACCAGATTATGACAATG
CCTCTGAAGGTGTTCCGTACCCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_174471 protein BREVIS RADIX [Arabidopsis thaliana]3522e-031
ABG25053 brevis radix [Arabidopsis thaliana]3522e-031
ABG25052 truncated brevis radix [Arabidopsis thaliana]3522e-031
XP_002890954 NIP3_1/NLM9 [Arabidopsis lyrata subsp. lyrata]3486e-031
XP_002326585 predicted protein [Populus trichocarpa]2842e-023

Swiss-Prot top hits (Blast detail)Scoree value
Q17TI5 Protein BREVIS RADIX3591e-033
O82281 Protein Brevis radix-like 12623e-022
Q5HZ09 Protein Brevis radix-like 31611e-010
Q6YUB8 Protein Brevis radix-like 11521e-009
Q7XPT0 Putative protein Brevis radix-like 31413e-008

TrEMBL top hits (Blast detail)Scoree value
B9MUC5 Predicted protein2841e-023
B9GZV5 Predicted protein2785e-023
Q7XA23 Major intrinsic protein, putative1925e-013
A5AXI0 Putative uncharacterized protein1801e-011
C6TI58 Putative uncharacterized protein (Fragment)1782e-011

Arabidopsis top hits (Blast detail)Scoree value
AT1G31880.1 BRX (BREVIS RADIX); identical protein binding / water channel3591e-034
AT2G35600.1 BRXL1 (BREVIS RADIX LIKE 1)2622e-023
AT1G54180.1 BRX-LIKE3 (BREVIS RADIX-LIKE 3)1611e-011
AT1G54180.2 BRX-LIKE3 (BREVIS RADIX-LIKE 3)1611e-011
AT3G14000.1 ATBRXL21332e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members