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Information for unigene UN54917
| FASTA Sequence |
| Unigene ID: UN54917 | Length: 770 |
SSR | | GGATCTAAAACCCCTCGTTTCTCTCTCTCTCTCTCCCTCTTCACCTGCACCATATCTCTGACCCGGCGAAGCTAGCCGTTCTCTCC
CAACCGCAACGCGCCGGAGATTTGTAGTAGAGTCATGAAGAAGCTTATATCACTTGTCAGGAACCTTCATTCACGCCAATGCCACC
AACCCAAAGCAAACTGGTCTGTGCAAGCGCGTTTCTTGCAGCAAGACTCTGTATCAAAACCCAAACCCAAGAAATACAAGTACCCG
TCGCTCTATGATCCGTACGGTCCTAGACCCCAGCCTTCGAGCAAGATCGTGGAGCTAGCCGAGCGTATCGCCGCTCTATCTCCGGA
AGAGCGGAAACAGATCGGTCCCGCACTCAACGAGCACCTGAGGCTTCCGAAACAGCAGATGATCTCAGGGCAAGGCGTGAGTATGG
GAGGGAAGCAGGATGCTGGAGGAGGGAAAGTAGTGGAGGAGAAGAAGGAGAAGACGTCTTTCGATGTGAAGCTGGAGAAGTTTGAT
ACAGCTGCGAAGATCAAAGTGATCAAAGAAGTGAGAGCGTTCACGGGTTTGGGTCTCAAGGAAGCGAAGGAGCTTGTGGAGAAAGT
ACCCGTCGTGATTAAACAAGGTTTGACGAAGGAAGAAGCTAATGGAATCATAGAGAAGATCAAAGCTGTAGTGGAGTCGCGGTTAT
GGAGTAAGTGATTTTGAAACACACTTGTGTTTCTCTTTGTCTCTTGGTTATTGTGTTTGGTCACAATGTAATAACAATCAAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187255 ribosomal protein L12/ ATP-dependent Clp protease adaptor protein [Arabidopsis thaliana] | 728 | 6e-075 |
| XP_002884554 ribosomal protein L12 family protein [Arabidopsis lyrata subsp. lyrata] | 722 | 3e-074 |
| XP_002321601 predicted protein [Populus trichocarpa] | 557 | 4e-055 |
| XP_002282612 PREDICTED: hypothetical protein [Vitis vinifera] | 555 | 7e-055 |
| XP_002511394 50S ribosomal protein L7/L12, putative [Ricinus communis] | 544 | 1e-053 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A2C031 50S ribosomal protein L7/L12 | 209 | 4e-016 |
| Q46HH2 50S ribosomal protein L7/L12 | 205 | 1e-015 |
| Q7U3T9 50S ribosomal protein L7/L12 | 205 | 1e-015 |
| A9BDG4 50S ribosomal protein L7/L12 | 203 | 2e-015 |
| Q0I6L0 50S ribosomal protein L7/L12 | 197 | 1e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M7T1 Putative uncharacterized protein At3g06040 | 728 | 4e-075 |
| B9IES3 Predicted protein | 557 | 3e-055 |
| B9RB19 50S ribosomal protein L7/L12, putative | 544 | 9e-054 |
| Q3HVP5 Putative uncharacterized protein | 531 | 3e-052 |
| C6SZ68 Putative uncharacterized protein | 515 | 2e-050 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G06040.1 ribosomal protein L12 family protein | 728 | 3e-077 |
| AT3G06040.2 ribosomal protein L12 family protein | 728 | 3e-077 |
| AT3G06040.3 ribosomal protein L12 family protein | 728 | 3e-077 |
| AT4G37660.1 ribosomal protein L12 family protein | 259 | 6e-023 |
| AT4G36420.1 ribosomal protein L12 family protein | 248 | 1e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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