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Information for unigene UN54939

FASTA Sequence
Unigene ID: UN54939Length: 792 SSR 
GTCTCATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGGACGGGAAGTGGTGTTTCCA
GTGGCGGACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGGGAACAACACCTGGAAACGGCTGCTAATACCCCGTAGGCTGA
GGAGCAAAAGGAGGAATCCGCCCGAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGATTACATCAAAGAGCTGTTA
AGGACGATAGAGGAGTTCAAGATGCTTTTGGAGAAGAAAAAGTTGGAGGAGTTCAGGAGCATGAAGAAAGCTAAAACTGATGGAGA
AGAAGAAGAAGAAGAAAACAATGTGAGTTACAGGCAACAGAGCCAAGTAGACCAATCTTGTTTCAACAAGAAGTCACTTAGATGTT
CTTGGCTGAAGAGGAAATCGAAACTCACTGAGGTTGATGTACGCATAATAGATGATGAAGTGACCATCAAGGTCGTTCAGAAGAAG
AAGATTAACTGTTTGTTGTTTACAAGTAAAGCTCTTGATCAGCTTAAACTGGATCTTCACCATGTTGCGGGAAGACAGATTGGTGA
GCATTACAGCTTCTTGTTCAACGCTAAGATTTGTGAAGGATCTTGTGTGTATGCAAGTGGAATTGCAGACACAGTGATGGAGCTGT
GGAGAAGCAGTATATGGAAGCGGTTCCTACCAACGGCTACTGAAAGACAGACAGTGGTGTCTAATTGCTTTTTTACCCCCTAATGA
CTGATAGTATACTCGCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879313 hypothetical protein ARALYDRAFT_482049 [Arabidopsis lyrata subsp. lyrata]6354e-064
XP_002892324 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata]5306e-052
NP_172107 transcription factor bHLH89 [Arabidopsis thaliana]5271e-051
NP_180680 transcription factor bHLH10 [Arabidopsis thaliana]5082e-049
AAL55717 putative transcription factor BHLH10 [Arabidopsis thaliana]5082e-049

Swiss-Prot top hits (Blast detail)Scoree value
Q84TK1 Transcription factor bHLH106371e-065
Q9LND0 Transcription factor bHLH895276e-053
Q8GX46 Transcription factor bHLH914183e-040

TrEMBL top hits (Blast detail)Scoree value
B9H9L2 Predicted protein4678e-045
B9IIJ6 Predicted protein4623e-044
B9T7Y5 Transcription factor ICE1, putative4524e-043
A5BKY1 Putative uncharacterized protein4472e-042
C0JP25 Putative basic helix-loop-helix protein BHLH143801e-034

Arabidopsis top hits (Blast detail)Scoree value
AT2G31220.1 basic helix-loop-helix (bHLH) family protein6379e-067
AT1G06170.1 basic helix-loop-helix (bHLH) family protein5275e-054
AT1G06170.2 basic helix-loop-helix (bHLH) family protein5275e-054
AT2G31210.1 basic helix-loop-helix (bHLH) family protein4182e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members