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Information for unigene UN54949

FASTA Sequence
Unigene ID: UN54949Length: 534 SSR 
GGAAGTCCGTTCTCTTTCTCTCTCTCTCCGCGCCGTTACTTCTCTGACGGTAGCATCATCTCCTCTCCTTTCACATCGTTCAACTC
AAACATTGATATCTGGATTTCGGGTGGGGATGACGCTAGGGTTGTTATCAGCGATTGGAAGATCATTCCGAAGAAAGCGAGCGTCT
TCTCTTGATATTCTCTCTCCCAAACGAGCTCCCAGAGATTTCTACAAGGGCAAAAACTGCAAACCTACTGGTTTCCACACCAAAAA
AAGGAGGATATGTTGTGCAGCATGATAAATTACCAAACTACGTAATCCCTGATCTCACCGGCTTTAAGCTGAAACCATACGTGTCT
CAGTGCCCTATAGAGGTCAACAAAACAACTGAAGCTTCCAAGTGAACATGTCCGAAGAAAATATGTTCCGAGCCTTATAATAAAGC
TTAAAGTTAAGCAATTTGTGTTTGTTGCGAAATTCGTATTTTATTTTCTTCAAGGACTTCAAGCAACTTGTGACAAATTTTGAGTT
ATTAATGTTTTGCTCTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001118953 Mitochondrial ribosomal protein L27 [Arabidopsis thaliana]2336e-018
XP_002872362 predicted protein [Arabidopsis lyrata subsp. lyrata]2282e-017
NP_198824 Mitochondrial ribosomal protein L27 [Arabidopsis thaliana]2247e-017
NP_568574 Mitochondrial ribosomal protein L27 [Arabidopsis thaliana]2211e-016
AAM63883 unknown [Arabidopsis thaliana]2211e-016

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
B3H7J5 Uncharacterized protein At4g09012.12282e-017
Q9LUJ9 At5g400802245e-017
Q8GXS6 Putative uncharacterized protein At5g398002211e-016
Q8LC32 Putative uncharacterized protein2211e-016
A5AXC0 Putative uncharacterized protein2121e-015

Arabidopsis top hits (Blast detail)Scoree value
AT4G09012.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: 60S ribosomal protein-related (TAIR:AT5G40080.1); Has 124 Blast hits to 124 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 23; Plants - 25; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).2281e-019
AT5G40080.1 60S ribosomal protein-related2244e-019
AT5G39800.1 60S ribosomal protein-related2218e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members