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Information for unigene UN54971

FASTA Sequence
Unigene ID: UN54971Length: 644 SSR 
TCACTGCTCTTCATACGGGCGCTGGGCCTGTGGTGATGTTAGTATATCCACTGTACGCATCGGTGGTAGCGATGGAGACCGCAACG
AAAGTAGACGATGAACAGTGGCTATCCTACTGGATCATTTACTCGTTCCTCACACTCACGGAGCTGATTCTACAATCGCTTCTTGA
GTGGATTCCTATTTAGTACTCGGTCAAACTTGTTTTCGTCGCTTGGTTGGTTCTGCCTCAGTTCCATGGCGCAGCTTTCATTTACA
ACCGTTTGGTGCGAGAACAGTTCAAGAAACACGGCGTCTTCCCTCACCAACAGTCAAAGGCCACCAAGCCCAAGATCCTTAACTCC
ATTTTCCCCCACCGGGAGGGACACGAGGCGCACTCTCACTGACTGAAGGAAAAAAGAAAAAGAAAGCTTGACTGGCATTGGTGGAG
TTGGTAGTGGTCCCATCTTGTCTAATCTTACGTTTTATTTTTGTTTTGTTTATACAAAAAAAAAGAATGGGTTTGAGAATGATATG
ATCATATGATGATGACTGAAGTTGTGTGGTCGGAAATGACTTGTAACACTTGTTGTTGTTGTTGTTGTATTTTCTTAGCTTCCACG
CATCTTTTCCATTTGGGAACACAATGTTTCGCTATTGTTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567713 HVA22-like protein d [Arabidopsis thaliana]5734e-057
ACJ09230 HVA22d [Arabidopsis thaliana]5725e-057
XP_002869697 hypothetical protein ARALYDRAFT_914090 [Arabidopsis lyrata subsp. lyrata]5708e-057
ACJ09256 HVA22d [Arabidopsis thaliana]5691e-056
ACJ09250 HVA22d [Arabidopsis thaliana]5662e-056

Swiss-Prot top hits (Blast detail)Scoree value
Q9S760 HVA22-like protein d5732e-058
Q9FED2 HVA22-like protein e4253e-041
Q07764 Protein HVA223482e-032
Q9S7V4 HVA22-like protein a2792e-024
Q682H0 HVA22-like protein f2604e-022

TrEMBL top hits (Blast detail)Scoree value
B6VAJ6 HVA22d5733e-057
B6VAJ7 HVA22d5723e-057
B6VAM3 HVA22d5698e-057
B6VAL7 HVA22d5662e-056
B3H763 Uncharacterized protein At4g24960.24675e-045

Arabidopsis top hits (Blast detail)Scoree value
AT4G24960.1 ATHVA22D5741e-059
AT4G24960.2 ATHVA22D4683e-047
AT5G50720.1 ATHVA22E4253e-042
AT1G74520.1 ATHVA22A2792e-025
AT2G42820.1 HVA22F (HVA22-LIKE PROTEIN F)2604e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members