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Information for unigene UN54974

FASTA Sequence
Unigene ID: UN54974Length: 767 SSR 
GGAGAACAAGTTCACTAAAACCCCTCTCTCTCTCTCTCTCTCTCTAGACTTGTGTGCAGTTCCGTCGACAACAATGTCTTCCAAGG
GACTGAAACCGACCAAGAGGAAAGATAACGAAAGCTCCGAGAAACCAGATGCTAAGAAGCCGAAGCTACCCCCGAATACGATTCAG
AACCAAAAGCCGAAAGCTTTTGGAAACAACAACGACAAGGGTGTTAACCTGTCCAAGAAGGAGCGTCGCGTACAAGCCAAGGAGCT
GACAGAAGCAAGGAAGAAGAGGAGGAAGCCTCACTACACGCTTGAGCAAGAGCTTGCAACTCTGTGGGAGAAGATGAGGCGTCGTG
ATATTGGCAAGGAGGACCGTTTAAAGCTGATATCGGAAGCTTTACTGAAGATGAAGGGGAAAATGCACGAGATTGCTGTCTCTCAT
GTGTCTTCCCGTGTTCTCCAGACTTGTTTGAAGTATTGCTCACAAGCCGAGAAGGAAGTTGTATACAAGGAACTTCATCCGCACTT
TCTGAGCCTGTCTTCTAATACATACTCTGTTCACGTGCTGAAGAAGATGCTGGATGGAGCATCTAAGCAGCAGCTTTCAGCTTGTA
TATCCAGCCTCCGTGGACACGTGGCCGCTCTCCTCCGTCACATGGTCGGATCTGTTGTTGTGGAGCATGCGTACCATCTGGGGAAT
GCAGCACAGAAACAAGAACTCCTTGGAGAGTTGTACTCAACAGAGCTTCAGTTATTCAAAGACTTGAACTCAACTTCCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885165 predicted protein [Arabidopsis lyrata subsp. lyrata]7932e-082
NP_566559 protein pumilio 24 [Arabidopsis thaliana]7752e-080
XP_002516980 Protein penguin, putative [Ricinus communis]7171e-073
XP_002314353 predicted protein [Populus trichocarpa]7035e-072
XP_002862289 predicted protein [Arabidopsis lyrata subsp. lyrata]6963e-071

Swiss-Prot top hits (Blast detail)Scoree value
Q09622 Pumilio domain-containing protein 122354e-019
Q07807 mRNA-binding protein PUF31583e-010
Q14671 Pumilio homolog 11306e-007
Q5R5X3 Pumilio homolog 11306e-007

TrEMBL top hits (Blast detail)Scoree value
Q9LRZ3 AT3g16810/K20I9_37751e-080
B9RTB1 Protein penguin, putative7178e-074
B9HXE2 Predicted protein7033e-072
B9N014 Predicted protein6918e-071
A5AH26 Putative uncharacterized protein6891e-070

Arabidopsis top hits (Blast detail)Scoree value
AT3G16810.1 APUM24 (Arabidopsis Pumilio 24); RNA binding / binding7759e-083

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members