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Information for unigene UN55016
| FASTA Sequence |
| Unigene ID: UN55016 | Length: 699 |
SSR | | GGAACTCCACGGCGCAGATCCGAGGAGTTTCTGCTCTCTTTTGAACATTTCTTCTCTCTCTCTCTCTAGATCTCTCTTCTTCCCTT
CTCTAACATCAGTCATGGCAGGAATGGCGTCAGAAGGAACCCAGTATGATCCTCGTCAGTTTGATTCTAAGATGAATGCAATACTC
GGTGAGGAAGGAGAAGAAACTTTCTACACCACAATTGATGAAGTATGTGATAGCTTTGATGCTATGGAACTCAGGTCTGATCTCCT
TAGAGGCATCTATGCCTACGGTTTTGAGAAGCCTTCTGCTATTCAACAGAGAGGGATCATACCATTCTGCAAGGGTCTTGACGTGA
TCCAGCAAGCTCAATCCGGAACCGGAAAGACCGCTACCTTCTGCTCCGGCGTTCTACAGCAGCTTGACTACACTCTTGTTCAGTGC
CAAGCTCTCGTTCTGGCTCCCACCAGAGAACTCGCTCAGCAGATCGAGAAGGTCATGAGGGCTCTCGGTGACTACCTCGGTGTCAA
GGTCCACGCCTGCGTCGGTGGAACGAGCGTCCGTGAGGATCAACGCATTCTCCAGTCTGGTGTCCACGTTGTTGTCGGAACGCCCG
GTCGTGTCTTCGACATGTTGCGTAGACGGTCTCTCCGCGCTGATGCAATCAAGATGTTTGTTCTTGACGAAGCGGATGAGATGCTC
TCTCGTGGTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAA09211 RNA helicase [Arabidopsis thaliana] | 971 | 3e-103 |
| NP_177417 translation initiation factor 4A-3 [Arabidopsis thaliana] | 957 | 1e-101 |
| XP_002888890 predicted protein [Arabidopsis lyrata subsp. lyrata] | 953 | 4e-101 |
| Q40467 RecName: Full=Eukaryotic initiation factor 4A-14; Short=eIF-4A-14; AltName: Full=ATP-dependent RNA helicase eIF4A-14 | 868 | 3e-091 |
| Q40466 RecName: Full=Eukaryotic initiation factor 4A-13; Short=eIF-4A-13; AltName: Full=ATP-dependent RNA helicase eIF4A-13 | 868 | 3e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9CAI7 Eukaryotic initiation factor 4A-3 | 957 | 6e-103 |
| P41382 Eukaryotic initiation factor 4A-10 | 868 | 1e-092 |
| Q40466 Eukaryotic initiation factor 4A-13 (Fragment) | 868 | 1e-092 |
| Q40467 Eukaryotic initiation factor 4A-14 | 868 | 1e-092 |
| P41379 Eukaryotic initiation factor 4A-2 | 868 | 1e-092 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B9S5V7 Dead box ATP-dependent RNA helicase, putative | 865 | 4e-091 |
| B9RK89 Dead box ATP-dependent RNA helicase, putative | 859 | 2e-090 |
| C6TI26 Putative uncharacterized protein | 859 | 2e-090 |
| C0Z2Q9 AT3G13920 protein | 855 | 6e-090 |
| Q2V3W0 Putative uncharacterized protein At3g13920.2 | 855 | 6e-090 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G72730.1 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative | 957 | 6e-104 |
| AT3G13920.1 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor | 855 | 4e-092 |
| AT3G13920.2 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor | 855 | 4e-092 |
| AT1G54270.1 EIF4A-2; ATP-dependent helicase/ translation initiation factor | 847 | 3e-091 |
| AT3G13920.3 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor | 790 | 1e-084 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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