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Information for unigene UN55088

FASTA Sequence
Unigene ID: UN55088Length: 644 SSR 
GGGAAGAAGAAGAAGAAAGGCAAGAGAGGAGAGAGCTTTAAAATCCTATTTTCTAGGGTTTGTCTTCCCTAGAGGGAATTTCAGAG
GCTTAGCAGCAGAGGGAGAGACTTCAATTTTTACCAAGAAATGTTGACGGTAAGAGAGGACCACACAGGTAGGTTTCTAGCAAGCT
CGAGCATTTCTAGGCCAAGGAAGATTCGGATTCATGGCTACAAGATACCGGATCTGAACCTAGACCCTTGCCTGGATGAAGAAGTA
ACGAAAGAGGTGGTTGGTTCTAAACAACAGGATGCAGATTACGTTCCTCAGCTTGCTTACGAGCTAGAGGTCGAGATACTCTCACG
CGTCCCGCGTTTTGAGTATTGGAAACTAAACCTTCAGAGCAAACGCTTTTCGCGTTTACTAAAAAGCGGTAAGATATTCAAGGTGC
GGCGAGACCGCGGTGTGGTCGAACCGTCTGTCTTTATGCTGTCAAACGGCGACACGAGGTGGACCATGTTCGATAAGGACTTCGAG
AAGTTTCAGAAGGTTCCTGAACTTCCTTCCGACATGTGTTTCTTCCGTGGAGACAAAGAATCGCTCTGCGCTGGAACGCATTTGAT
CGTCACTGGGAAGGAGGAGAAGAGCATTGCCTTGTGGAGGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_189351 F-box/kelch-repeat protein [Arabidopsis thaliana]6192e-062
XP_002877020 kelch repeat-containing F-box family protein [Arabidopsis lyrata subsp. lyrata]5286e-052
NP_198884 kelch repeat-containing protein [Arabidopsis thaliana]4524e-043
XP_002870686 kelch repeat-containing F-box family protein [Arabidopsis lyrata subsp. lyrata]4051e-037
XP_002273717 PREDICTED: hypothetical protein [Vitis vinifera]3791e-034

Swiss-Prot top hits (Blast detail)Scoree value
Q9LI89 F-box/kelch-repeat protein At3g271506199e-064
Q8L736 F-box/kelch-repeat protein SKIP111672e-011
Q84M94 F-box/kelch-repeat protein At1g269301611e-010
Q9CA63 F-box/kelch-repeat protein At1g745101512e-009

TrEMBL top hits (Blast detail)Scoree value
Q9FM30 Similarity to unknown protein4523e-043
A5AZ59 Putative uncharacterized protein3771e-034
B9RBJ2 Ubiquitin-protein ligase, putative3555e-032
B9GJS6 F-box family protein3466e-031
B9N0Z8 F-box family protein3412e-030

Arabidopsis top hits (Blast detail)Scoree value
AT3G27150.1 kelch repeat-containing F-box family protein6198e-065
AT5G40680.1 kelch repeat-containing F-box family protein4522e-045
AT5G60570.1 kelch repeat-containing F-box family protein1969e-016
AT2G02870.1 kelch repeat-containing F-box family protein1672e-012
AT2G02870.2 kelch repeat-containing F-box family protein1672e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  100%

Unigene Members