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Information for unigene UN55105
| FASTA Sequence |
| Unigene ID: UN55105 | Length: 764 |
SSR | | GGCCGGTGACATTGATCGGAGATTCTCACTACCTCAAGAACCTCGAAAACTCCCGCGAGATGGGGATAGAGATATCAGGTCAAATC
GAGAAAATCAATGGCAAAGAGCTGAGCTACAACGACTTCGCAGAGAGGTACTTAGCCAAGAGCCAGCCGGTGGTAATCTCCGATCT
CACCGAAGATTGGCTAGCTCGGAAAGATTGGGTCGATGAGAATGGACTCCCTAATCTCAATTTCTTCGCTACACACTTCGGAAAGT
CCAGAGTTCAGGTTGCAGATTGTGATAGGAGAGAGTATACAGATCAGAAGAGATTAGAAATGTCTGTTTTGGAGTTTGTTGAGCAA
TGGGCTAATAAGGATTCTGTTAAGGACAATGGAGATGATGATGATGATGATGGAGAGTCTGTGTTGTATCTGAAAGACTGGCACTT
TGTCAAGGAGTATCCAGACTATACAGCCTACAAGACGCCACAGGTGTTTTCTGATGACTGGCTTAATATCTATTTAGACCATTACC
AAATGCATGAGGATAGAGAGAGTTTCCAGAAGTACGATCAAATAAGCTGCGCTGATTATCGGTTTGTTTATATGGGTGGGAAAGGA
TCTTGGACACCTCTGCACGCTGATGTATTTAGATCTTATAGTTGGTCAGCTAATGTTTGTGGTAGAAAAGATGGCTTTTTCTTCTT
CCTTCTCAAAGTCATCTTGTTTATGACAGTACATGAAAAATTGCGTTTACAACATATTTGAAGAGGTGAATGAAAC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002511357 transcription factor, putative [Ricinus communis] | 766 | 2e-079 |
| XP_002278337 PREDICTED: similar to transcription factor jumonji (jmjC) domain-containing protein [Vitis vinifera] | 730 | 3e-075 |
| CBI14986 unnamed protein product [Vitis vinifera] | 730 | 3e-075 |
| BAK03160 predicted protein [Hordeum vulgare subsp. vulgare] | 614 | 1e-061 |
| EEC70847 hypothetical protein OsI_02352 [Oryza sativa Indica Group] | 607 | 6e-061 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q08BY5 JmjC domain-containing protein 4 | 257 | 1e-021 |
| Q5ZHV5 JmjC domain-containing protein 4 | 246 | 2e-020 |
| Q9H9V9 JmjC domain-containing protein 4 | 194 | 2e-014 |
| Q8BFT6 JmjC domain-containing protein 4 | 170 | 1e-011 |
| Q9VJ97 JmjC domain-containing protein 4 homolog | 136 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B9RAY2 Transcription factor, putative | 766 | 2e-079 |
| B8A9Z6 Putative uncharacterized protein | 607 | 4e-061 |
| B9EXF8 Putative uncharacterized protein | 607 | 4e-061 |
| Q67ZB6 At5g63080 | 494 | 5e-048 |
| Q9FML5 Genomic DNA, chromosome 5, P1 clone:MDC12 | 494 | 5e-048 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G63080.1 transcription factor jumonji (jmjC) domain-containing protein | 494 | 3e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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