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Information for unigene UN55190
| FASTA Sequence |
| Unigene ID: UN55190 | Length: 751 |
SSR | | GGGAACAAAAGAAAAGAAAGATAGAAAACTTGTCATCTCTCTCTCTCTCCAATGGAGAATGTGATCATAAAGTTCATGTTTTTAGG
ATTCTGGGTTTATGATTCTGTTTACGCCATGGATAGTCTCTTATCTCCAAAGGGTGTTAACTACTAAGTTGCTGCGTTGATGTCAG
TGAAGAACAAGATGAAAGATGAAACAGAGGTTTTGTCTGGTTGGGATATAAACTCTGTTGATCCTTGTACTTGGAACATGGTTGGT
TGCTCTGCTGAAGGTTTTGTCGTTTCTCTAGAGATGGCTAGTAAAGGATTATCAGGGACAATATCAACAAATATTGGAGAGTTTAC
TCATCTTCATACATTGTTAATACAGAATAACCAGTTAACCGGTCCAATACCTTCAGAGTTAGGCCAACTCTCTGAGCTTAAGACTC
TTGATCTCTCTGGGAACCGGTTTAGTGGAAAAATCCCAGCTTCTTTAGGGTTCCTAACTCACCTAAACTACTTGCGGCTCAGCAGA
AACCTTTTATCAGGGCGAATCCCTCAGCTTGTTGCTGGCCTCTCAGGATCTATCTTTCAACAACCTAAGTGGACCAACACCGCGTA
TATTAGCAAAAGATTATAGGATTGTAGGAAATGCATTCCTTTGTGGTTCAGCTTCCTTAGAGCTTTGCTCAGATGCTGCTACACCC
GTGAGGATGCATCAGGTTGTCTGAAAAGGACATAGCAACATCACAGCTTAGTACTCTCTTTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863454 hypothetical protein ARALYDRAFT_330836 [Arabidopsis lyrata subsp. lyrata] | 782 | 3e-081 |
| NP_199390 putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] | 771 | 6e-080 |
| XP_002317403 predicted protein [Populus trichocarpa] | 587 | 1e-058 |
| XP_002522232 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] | 580 | 8e-058 |
| ACD56664 putative leucine-rich repeat transmembrane protein [Gossypium arboreum] | 577 | 2e-057 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| C0LGU5 Probable LRR receptor-like serine/threonine-protein kinase At5g45780 | 771 | 3e-081 |
| Q0WVM4 Probable LRR receptor-like serine/threonine-protein kinase At2g23950 | 336 | 8e-031 |
| C0LGT1 Probable LRR receptor-like serine/threonine-protein kinase At5g10290 | 286 | 5e-025 |
| Q94F62 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 | 280 | 2e-024 |
| Q9XIC7 Somatic embryogenesis receptor kinase 2 | 273 | 2e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9I1J1 Predicted protein | 587 | 9e-059 |
| B9S8B3 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative | 580 | 6e-058 |
| B2ZAU7 Putative leucine-rich repeat transmembrane protein | 577 | 1e-057 |
| B9H2G4 Predicted protein | 576 | 2e-057 |
| Q6DXT2 Putative leucine-rich repeat transmembrane protein | 575 | 2e-057 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G45780.1 leucine-rich repeat transmembrane protein kinase, putative | 771 | 3e-082 |
| AT1G60800.1 NIK3 (NSP-INTERACTING KINASE 3); kinase | 431 | 7e-043 |
| AT5G16000.1 NIK1 (NSP-INTERACTING KINASE 1); kinase | 392 | 2e-038 |
| AT3G25560.1 NIK2 (NSP-INTERACTING KINASE 2); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase | 389 | 5e-038 |
| AT3G25560.2 NIK2 (NSP-INTERACTING KINASE 2); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase | 373 | 4e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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