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Information for unigene UN55237
| FASTA Sequence |
| Unigene ID: UN55237 | Length: 659 |
SSR | | GGAGTTCCGTGTTGCTAAAAGCCTCTGCGATCTTGATCCTCTGTTCATCGTACTAATGGATTCTTATTTTTCCCTTGCCAATTTTG
TTGCTACTGCAATATGCTGCTTGGCGCTCTTGGCTACAGTTTTTTCATCAAAAAATCCAGATCTCATCAAGAAAGCAAAACAATGG
CTTCTTCTTCTTCTTCTTCTTTAACTATGTTGGCTCCTCCGTCTTCTTTGCCTCGAAATCGGATACATCAGGTCTTCCCAAGCTTC
CACGGGGCAGATGTCCGCACAAACTTTCTCAGCCACGTTCTCAAGGATTTCACGAGCAAAGGAATCGACCTATTCATTGACAGTGA
CATACAGAGATGTCATGTTTTCCTTCAAGTTTTAATCCAGAGTTCCTAGTCCAAGTAGACATGAGGTTTAGCGGTCTGAAGAAATT
GTGGAAAGAAAATAAACCGCTCAACAATCTAAAGCTGATGGATTTGAGTATGTCTCAAAGATTGAAAGAGCTTCCTGATCTCTCAA
CTGCCACTAATCTTCAAGAATTGAATCTCCATGCTTGCTCGAGTCTAGTAAAGCTCCCATCTTCTATTGGGAATGCATCTAATCTC
CAAATACTGAATCTTAGTGATTGTTCAAGGCTGGTGAAGCTCCCTTCCACCATTGGG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002891312 predicted protein [Arabidopsis lyrata subsp. lyrata] | 353 | 1e-031 |
| NP_199264 target of AVRB operation1 protein [Arabidopsis thaliana] | 342 | 2e-030 |
| ABS82020 TAO1 [Arabidopsis thaliana] | 342 | 2e-030 |
| ABS82021 TAO1 [Arabidopsis thaliana] | 338 | 7e-030 |
| XP_002863569 hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp. lyrata] | 336 | 1e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82500 Putative disease resistance protein At4g11170 | 232 | 7e-019 |
| Q9FL92 Probable WRKY transcription factor 16 | 171 | 8e-012 |
| Q9SZ67 Probable WRKY transcription factor 19 | 153 | 1e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| A7LKN1 TAO1 | 342 | 2e-030 |
| Q9FI14 Disease resistance protein-like | 342 | 2e-030 |
| A7LKN2 TAO1 | 338 | 5e-030 |
| Q8S8G3 Disease resistance protein (TIR-NBS-LRR class), putative (Fragment) | 333 | 2e-029 |
| Q9ZSN6 Disease resistance protein RPP1-WsA | 327 | 9e-029 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G44510.1 TAO1 (TARGET OF AVRB OPERATION1); ATP binding / protein binding / transmembrane receptor | 342 | 1e-032 |
| AT2G14080.1 disease resistance protein (TIR-NBS-LRR class), putative | 333 | 1e-031 |
| AT3G44480.1 RPP1 (recognition of peronospora parasitica 1); LRR domain binding | 321 | 3e-030 |
| AT1G65850.1 disease resistance protein (TIR-NBS-LRR class), putative | 317 | 9e-030 |
| AT3G44400.1 disease resistance protein (TIR-NBS-LRR class), putative | 315 | 2e-029 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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