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Information for unigene UN55615

FASTA Sequence
Unigene ID: UN55615Length: 768 SSR 
GGAAGCTCAGAGCTCACTCTCTCTCTCTCAAATCTCCAAACTCACCACACTCTCTCTCCACAGTTTCAACAATGGCGAAGAAGATG
AGAGAAACCATATCCTACATTCTCCCAATCCTCCTCCTCCTCGCTTTCCAAACACACGCGCACAACGTCACGCGCCTCTTAGCAAG
CCACCCTTCTTTCTCCTCCTTCAACCACTTCCTCACCCAAACACACCTCGCCGGCGAAATCAACCGGAGAACAACCATAACCGTCC
TAGCCGTCGACAACGCCGCCATGTCCGCCTTAACCTCGAAAGGCTACACCATCTCCACCATCAAGAACATCCTCTCCCTCCACGTC
CTCCTCGACTACTTCGGCGCCAAGAAAATCCACCAGATCCGCGACGGCTCAGCTCTCGCCGCCACTCTCTTCCAAGCCACCGGAGC
TGCTCCGGGAACCACCGGGTTCGTAAACATAACGGATCTGAGAGGCGGCAAGGTCGGGCTCGGTCCCGACGGCGGAGATCTGTCTT
CCTTCTTCGTCGAGTCCGTTGAGGAAGTTCCCTACAACATCTCCATCATCCAGATCAGCAAAGTCTTGCCATCGGAAACCGCGTCG
GCTCCGAGTCCGGCTCCGGCGGAGATGAATCTCACCGGAACAATGTCGGCTCATGGCTGTAAAGTTTTCGCCGAGACGCTTCTCGC
TAACACTGGTGCTTCAAAAACTTACCAGGAGAGTGTAGAAAGAGGCATGACAGTGTTCTGTCCAGGAGATGACGCCATGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866110 hypothetical protein ARALYDRAFT_495659 [Arabidopsis lyrata subsp. lyrata]10387e-111
NP_200384 fasciclin-like arabinogalactan protein 1 [Arabidopsis thaliana]10153e-108
XP_002298869 fasciclin-like arabinogalactan protein [Populus trichocarpa]7941e-082
ABV27481 fasciclin-like arabinogalactan protein 10 [Gossypium hirsutum]7922e-082
ABV27482 fasciclin-like arabinogalactan protein 11 [Gossypium hirsutum]7904e-082

Swiss-Prot top hits (Blast detail)Scoree value
Q9FM65 Fasciclin-like arabinogalactan protein 110151e-109
Q9SU13 Fasciclin-like arabinogalactan protein 26352e-065
O22126 Fasciclin-like arabinogalactan protein 85446e-055
Q9LZX4 Fasciclin-like arabinogalactan protein 105123e-051
Q9LTW9 Fasciclin-like arabinogalactan protein 143091e-027

TrEMBL top hits (Blast detail)Scoree value
B9GFM2 Fasciclin-like arabinogalactan protein (Fragment)7949e-083
A9XTL5 Fasciclin-like arabinogalactan protein 107922e-082
A9XTL6 Fasciclin-like arabinogalactan protein 117903e-082
B9I1A6 Fasciclin-like arabinogalactan protein (Fragment)7822e-081
B9S9S6 Putative uncharacterized protein7822e-081

Arabidopsis top hits (Blast detail)Scoree value
AT5G55730.1 FLA1 (FASCICLIN-LIKE ARAB INOGALACTAN 1)10151e-110
AT4G12730.1 FLA2 (FASCICLIN-LIKE ARABINOGALACTAN 2)6352e-066
AT2G45470.1 FLA8 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8)5445e-056
AT3G60900.1 FLA105123e-052
AT3G12660.1 FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR)3091e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

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