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Information for unigene UN55759
| FASTA Sequence |
| Unigene ID: UN55759 | Length: 798 |
SSR | | GGGCACCCGAAAAGCCTTCGTCTTTCTATCTCTACATCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCCTTCCT
CTCTCCTCTCTCTATCTTTCTCAGTACGTTTTCGATTGACGCCATTGAAAATTGAGTTAAATCGGTTTGAATCGGATTGAACAGAA
CCATTCTCATTCGTGTGTGTTTGCTTCTTCTCTTCTCTCAATCGTTCGTTTCTGTGGACAAAAAGGGGGGCAGGTTTGAGTTATGC
CCTCTATTCAAATCGCCCCTATCCTCCTCAGATCTTAGCCTTCCCCTCGACGAGATTCAGCATCTGGGTTTTCTTTATCTGATTGA
GGAGCGAAAAGAAAAATGCAATCGGACAATGGAAAGCTGTTCATCGGAGGGATATCTTGGGACACCAATGAGGAACGTCTCAAGGA
GTATTTCAGCACGTTCGGTGAAGTCATCGAAGCTGTGATCTTGAAAGATCGCACCACGGGCCGTGCACGTGGCTTCGGCTTTGTTG
TCTTTGCTGATCCAGCTGTCGCTGAGTTTGTTATCACCGAGAAGCATCACATCGATGGCAGATTGGTTGAAGCCAAGAAGGCTGTT
CCTAGAGATGACCAGAACATGGTGACCAGAAGCAACAGCAGCAGCATCCAAGGATCACCTGGTGGTGGTGGTGGTGGTGGTGGTCC
AGGAGTAGTTCGTACGAGAAGATATTCGTCGGAGGGTTACCTTCTTCCGTCACTGAAAGCGACTTCAGACCTACTTCGAGCAGTTT
GGGACGACCACCGATGTGGTTGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_850539 RNA recognition motif-containing protein [Arabidopsis thaliana] | 511 | 9e-050 |
| AAF21191 putative RNA-binding protein [Arabidopsis thaliana] | 511 | 9e-050 |
| NP_566321 RNA recognition motif-containing protein [Arabidopsis thaliana] | 511 | 9e-050 |
| XP_002882552 hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp. lyrata] | 511 | 9e-050 |
| AAK92717 putative RNA-binding protein [Arabidopsis thaliana] | 505 | 5e-049 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O94432 Uncharacterized RNA-binding protein C660.15 | 263 | 2e-022 |
| Q96DH6 RNA-binding protein Musashi homolog 2 | 251 | 6e-021 |
| Q920Q6 RNA-binding protein Musashi homolog 2 | 251 | 6e-021 |
| Q99729 Heterogeneous nuclear ribonucleoprotein A/B | 242 | 7e-020 |
| Q99383 Nuclear polyadenylated RNA-binding protein 4 | 241 | 9e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8W555 AT3g07810/F17A17_15 | 511 | 6e-050 |
| Q9SFD3 Putative RNA-binding protein | 511 | 6e-050 |
| Q94A00 Putative RNA-binding protein | 505 | 3e-049 |
| B9T191 Heterogeneous nuclear ribonucleoprotein 27C, putative | 457 | 1e-043 |
| B9GTG8 Predicted protein | 447 | 2e-042 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G07810.1 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 511 | 4e-052 |
| AT3G07810.2 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 511 | 4e-052 |
| AT4G26650.1 RNA recognition motif (RRM)-containing protein | 392 | 2e-038 |
| AT4G26650.2 RNA recognition motif (RRM)-containing protein | 392 | 2e-038 |
| AT5G55550.1 RNA recognition motif (RRM)-containing protein | 383 | 3e-037 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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