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Information for unigene UN55835
| FASTA Sequence |
| Unigene ID: UN55835 | Length: 796 |
SSR | | GGTAGGGAGAGCGAAGTGGAAGGTAGCTCACGTTTCGCTCCTTCTTCTCAGCCGCACGCACTTCTTCTTCTTCTTCATAGATTTGT
CAATTCTCGAGGATCTGTGTCTTTTTATGAGCTTTGGGTTTTGAAGAAAGATGGATCTATCTTCCCAACGACAATCCCCAAATGGA
TCAAGAGGGTTTCGCCTTCCGTATCTTGCTACTGCAGAGTAGATTCAGGTCTCAAGACCGTCGTAGAAGCAAGAAAGTTTGTTCCT
GGTTCAAAGCTTTGTATCCAACCTGATATCAATCCCAACGCTCATCGTCGCAGCAGCAGCAAGAACGCTAAGCGAGAGAGGACGAG
AATCCAACCTCCGCTTCTCCCTGGCCTCCCTGACGATCTAGCCTTCGCTTGCCTCATCCGTGTCCCTCGTTCACAACACAGGAAAC
TCAGGCTTGTGTGTAAGCGATGGTACAGGCTCGCTTCCGGGAACTTTTTCTACTCTCAGAGGAAGCTGCTCGGGATGTCTGAAGAA
TGGGTTTATGTTTTCAAAAGAGACCGTGACGGGAAGATCTCTTGGACCGCGTTTGATCCCGTCTCCCAGCAACCGCAGCCTCTTCC
ACCTGTTCCCAGAGAGTATTCAGAAGCTGTTGGGTTCGGTTGCGCGGTTCTAAGCGGTTGTCATCTTTACTTGTTCGGAGGTAAAG
ACCCGCTTAGAGGATCGATGAGGAGGGTCGTTTTCTATAATGCCAGGACGAATAAGTGGCGCAGGCACCTGATATGCTCAGAAGCG
ACACTTCTTTGGTTCTTGCGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAG51566 unknown protein; 58496-60308 [Arabidopsis thaliana] | 941 | 1e-099 |
| NP_564684 F-box/kelch-repeat protein [Arabidopsis thaliana] | 941 | 1e-099 |
| XP_002894497 kelch repeat-containing F-box family protein [Arabidopsis lyrata subsp. lyrata] | 941 | 1e-099 |
| XP_002527061 Protein AFR, putative [Ricinus communis] | 885 | 4e-093 |
| XP_002304010 predicted protein [Populus trichocarpa] | 869 | 3e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93W93 F-box/kelch-repeat protein At1g55270 | 941 | 6e-101 |
| Q9LM55 F-box/kelch-repeat protein At1g22040 | 212 | 2e-016 |
| Q9CAG8 F-box/kelch-repeat protein At1g67480 | 202 | 3e-015 |
| Q9C6Z0 F-box/kelch-repeat protein At1g30090 | 172 | 9e-012 |
| Q9M2C9 F-box/kelch-repeat protein SKIP4 | 161 | 2e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SM42 Protein AFR, putative | 885 | 3e-093 |
| B9GY93 Predicted protein | 869 | 2e-091 |
| B9GLH5 F-box family protein | 856 | 6e-090 |
| C6TJD0 Putative uncharacterized protein | 840 | 5e-088 |
| A5C9A3 Putative uncharacterized protein | 828 | 1e-086 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G55270.1 kelch repeat-containing F-box family protein | 941 | 5e-102 |
| AT1G22040.1 kelch repeat-containing F-box family protein | 212 | 2e-017 |
| AT1G67480.1 kelch repeat-containing F-box family protein | 202 | 3e-016 |
| AT1G67480.2 kelch repeat-containing F-box family protein | 202 | 3e-016 |
| AT1G30090.1 kelch repeat-containing F-box family protein | 172 | 8e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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