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Information for unigene UN55912
| FASTA Sequence |
| Unigene ID: UN55912 | Length: 805 |
SSR | | GGAGAGAAACGCAATGTCAGTTAGTTTTCTCTCGATGCTTCTACGTGCAGCAATATACCTAGAAACAACGGTTGCTTGTAGGCTTG
ACTTGGAGAAGAGAATGGGGTTACAGTTGTCACAAGCCGTACTTGACGATCTCTTGATTCCCTCTTACTCTTTCACTGGAGAACAT
TCGTTGTTTGATACAGACACTGTTCAACGCATTCTCGTGAACTATCTTGAGTTTGAAGTTGAAGGAGTACGGTTAAGCAACAATGG
TGCTGATCTTGCTGGTGACATGGAACGTGTTGGTAAACTGATGGAGACTTATTTGGCTGAGATAGCTTCTGATAGAAACGTGAGCT
TACAGAAGTTCATAGGTTTAGCTGAACTTATCCCTGAACAGTCTAGAGTTACTGAAGATGGGATGTACCGAGCCGTAGACATCTAC
TTGAAGGCGCATCCTAATATGAGTGACGTAGAGAGGAAGAAAGTATGCAGCTTAATGGATTGCCAGAAACTATCACGTGAAGCCTG
CGCTCACGCAGCTCAGAACGATCGTCTTCCCGTTCAAACCATTGTTCAAGTCCTTTACTACGAGCAACAACGTCTACGAGGAGAAT
TCACTAACGATACAGATCCTCCAGCACCACCACCACCACAACCTGCAGCAGCTGTTCTTCCACCTCCTAAGCTCAGCTCCTACAAC
GACGACTCTCCAAGTGAACGCGAGAACAGGACTTGAAACTTGACTTCTCAAATGAAGATGAGCTAAAGAGTTGAGAAGATATACTG
AGAGAGATCATCATCACACACATGAGCAGCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_680473 phototropic-responsive NPH3-like protein [Arabidopsis thaliana] | 1088 | 1e-116 |
| AAU05485 At5g67385 [Arabidopsis thaliana] | 1088 | 1e-116 |
| XP_002866705 signal transducer [Arabidopsis lyrata subsp. lyrata] | 1086 | 2e-116 |
| BAJ34215 unnamed protein product [Thellungiella halophila] | 1084 | 3e-116 |
| XP_002533158 Root phototropism protein, putative [Ricinus communis] | 801 | 2e-083 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FKB6 BTB/POZ domain-containing protein At5g48800 | 512 | 3e-051 |
| Q682S0 Root phototropism protein 2 | 442 | 4e-043 |
| Q9FMF5 Root phototropism protein 3 | 344 | 1e-031 |
| Q5KS50 Coleoptile phototropism protein 1 | 336 | 8e-031 |
| Q9S9Q9 BTB/POZ domain-containing protein At1g30440 | 331 | 3e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q66GP0 At5g67385 | 1088 | 8e-117 |
| B9T4I9 Root phototropism protein, putative | 801 | 2e-083 |
| A5AQA2 Putative uncharacterized protein | 786 | 8e-082 |
| B7ZX45 Putative uncharacterized protein | 643 | 3e-065 |
| B6UC07 Transposon protein Mutator sub-class | 634 | 4e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G67385.1 protein binding / signal transducer | 1088 | 5e-119 |
| AT5G48800.1 phototropic-responsive NPH3 family protein | 510 | 5e-052 |
| AT5G66560.1 phototropic-responsive NPH3 family protein | 481 | 1e-048 |
| AT3G08660.1 phototropic-responsive protein, putative | 470 | 2e-047 |
| AT5G13600.1 phototropic-responsive NPH3 family protein | 468 | 4e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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