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Information for unigene UN55929

FASTA Sequence
Unigene ID: UN55929Length: 776 SSR 
GGGTCGAAGAAGAACATTCCCGAAAAAGAGTAGAGAGAGAGAGACGAAAAGCGAAGCCCTAGCGTGTTTGTCTTCTCTTTGTTCCT
TTGCTTACGATCCGTTATCAATTCGCCCTTGTAGTAGCTTCAGGAGCCTTGCTTGCTTCGCTTCGCTTCGCTTCTCCTCTTGGTCT
AATCTTGGAACCCTTACTCGGATCAGATTTTCAGCTGCTTTTTGAATCCAAATGGACTGCAAGAAGTTCATGCAGATGGTGGAAGA
GAAGAAAAGGCAGATCCTTGAGAAGAAAGAAGCTCCTTTGAAATGGGAGCAGAAGCTTGAGGCGGCTGCCAAGGCTGCTGAAACCA
AAGAGAAGAGGTCAAAAAAGCGAAGACGACAGAGGGGTGAGTCTGAATCTAGCTCTGAAAGTGATAGTAGCTATGAGGTGAGTAGA
AAATCGAGAAGAACTCACAGTAAGCACCGAAGGCATTCACACTCTGATTCAGATGACAACGATAGGAGAAAAGATAAGAAATCCAG
AAGGCATGAGAGGAGGTCTTCAAGTTCAAGCGATGAGTACGAAAGCGGGTCAGAGGACGAGCTCAGGGTGAAGAAGATAAGGCACC
ACCGGAGGCACAAGTCGCATAGCTCAAGTCAGACTTCTGATGATGACACTGCTGATGATGCCAGAAGAAGCATGCTAAGTTTACTT
CAAGTGATAGCGAAGAGAGAGAGGAGGAGATAGACACAGCACACAGAAGTCAGCTACCTCCAGCGACTCAGATCAGAGCTAGACGG
AG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565251 uncharacterized protein [Arabidopsis thaliana]5512e-054
XP_002875060 hypothetical protein ARALYDRAFT_322459 [Arabidopsis lyrata subsp. lyrata]5252e-051
NP_001041870 Os01g0120700 [Oryza sativa Japonica Group]3981e-036
EAY72321 hypothetical protein OsI_00176 [Oryza sativa Indica Group]3981e-036
XP_002283977 PREDICTED: hypothetical protein [Vitis vinifera]3962e-036

Swiss-Prot top hits (Blast detail)Scoree value
P27476 Nuclear localization sequence-binding protein1485e-009
Q55FI4 Nucleolar protein 581441e-008
A5E4P1 Protein PXR11379e-008
O75400 Pre-mRNA-processing factor 40 homolog A1333e-007
P41891 Protein gar21324e-007

TrEMBL top hits (Blast detail)Scoree value
Q9SJV6 AT2G01100 protein5511e-054
A2WK25 Putative uncharacterized protein3988e-037
Q9LGP3 Os01g0120700 protein3988e-037
B9HJ82 Predicted protein3871e-035
B6TJ99 Sarcoplasmic reticulum histidine-rich calcium-binding protein3834e-035

Arabidopsis top hits (Blast detail)Scoree value
AT2G01100.1 unknown protein5519e-057
AT2G01100.2 unknown protein5519e-057
AT2G01100.3 unknown protein5519e-057
AT2G28910.1 CXIP4 (CAX INTERACTING PROTEIN 4); nucleic acid binding / zinc ion binding1531e-010
AT4G02720.1 unknown protein1468e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members