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Information for unigene UN56004

FASTA Sequence
Unigene ID: UN56004Length: 743 SSR 
GGGAGGATCTACGAAACTTCGATTTGGGGGTTTTCTTTTCTTCTAGATCCTAGCTAATTCGTCTAAAGACGTCGCCTTTTGACGAC
GACGACGACGACGACGACCCTTTCTCTCTTTTTCCTCCGCCTTCCTCCACGCACAACAAATCTCTCACTTTTTTTCCTCAACTATG
CCTTCCAATACGGCGTCGTCTAGCTCCGCCCCTGCCGGATCTGCAGATTCTTCCTCCTCCCGTACAAAATCCAAACGACCCAAGTA
TTCGAAGTTTACACAGCAGGAGCTTCCTGCTTGCAAGCCGATTCTCACGCCTGGTTGGGTGATTCTGACTTTTTTGGTCATTAGCG
TGATCTTCATTCCACTCGGAGTTGTTTCGCTTTTCGCTTCCCAGGATGTTGTTGAGATCGTTGATCGGTATGATAATGATTGCGTA
CCGACGCCTGCTAGGGCTAACAAGGTTGCCTTTATTCAAGGAGGTGGAGACAAATCTTGTAACCGGACACTTGTATTCACCATCAT
GTATCTTGTGGAACCAAGCGACTTGGAGATCCTACTTACTTATCCTGGAACAGAGTTCCCGGTGGTGGTCGGTAAACAAAGACTCT
TTTATCATCTGCTTTTATGTAATCTCTTTATCCATGATTGTAATTTTAGCCAAAACTGAGAGTGATAGTTTGTATTTATAGATGTG
TAGTGCATGATGATGTACAGTTGAAGATGCCACATGATGATGCGTCTATCATATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564656 ALA-interacting subunit 3 [Arabidopsis thaliana]4742e-045
XP_002894565 LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]4661e-044
NP_566435 ALA-interacting subunit 1 [Arabidopsis thaliana]4562e-043
XP_002882787 LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]4436e-042
NP_565210 ALA-interacting subunit 5 [Arabidopsis thaliana]3998e-037

Swiss-Prot top hits (Blast detail)Scoree value
Q9SLK2 ALA-interacting subunit 34747e-047
Q9LTW0 ALA-interacting subunit 14569e-045
Q8L8W0 ALA-interacting subunit 53994e-038
Q67YS6 Putative ALA-interacting subunit 22221e-017
Q9SA35 Putative ALA-interacting subunit 41924e-014

TrEMBL top hits (Blast detail)Scoree value
B9RRQ2 Putative uncharacterized protein3825e-035
B9HYB5 Predicted protein3522e-031
B9HI35 Predicted protein3451e-030
C6T8B4 Putative uncharacterized protein3395e-030
Q6BBR1 Putative uncharacterized protein Lj-CDC50 like 13243e-028

Arabidopsis top hits (Blast detail)Scoree value
AT1G54320.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein4747e-048
AT3G12740.1 ALIS1 (ALA-INTERACTING SUBUNIT 1); phospholipid transporter4568e-046
AT1G79450.1 ALIS5 (ALA-Interacting Subunit 5)3993e-039
AT1G16360.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein3261e-030
AT5G46150.2 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein2221e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  100%

Unigene Members