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Information for unigene UN56080
| FASTA Sequence |
| Unigene ID: UN56080 | Length: 847 |
SSR | | CTTCAATGGAACATATATATATATATGTCGAAAGTACCAAATGATTTGTATTAGTGCGAATGTAATTAACACAAACTTTAAACATA
AATTTTTAAAAACTTCTACACTTGAATAACAACACTCAGGTCGTTGCATGTGTCTTCGTTGATAAACCTCTCTGTAGCTGATGTAA
ACCGACGTATAATTAAATAAAAAGATTGAACACATAAGGGCTTGGAGTTGATATTATTGATCAGATGAGAGTTGTATGAATCAGCA
AGAACAACGTCTTGACTGCTCCTCATGAATGTCTGCAAAATATTCAGAAATAACTGGGATATATATGTTTTGTTTAAGGTCACTAG
AAAGAGTTTTGTGTGCAACACCCAAAAAGGCTTCATCCACATTAACATCTTCCTTTGCAGAGGTTTCATAGTACGGTATGTTTTCC
TTTGAACCACATCATTCAATGGCTCTCTTATCTGCAACAACTCGGCTGTTTCCGCCATCTGCATCGGTTTTGTTTCCAATCAAAAC
AAAAGGGAACGTTTCAAATTCCATAGGACTTGCCTGTTTAAGGAACTCAGAGTGCCAAGTATTGAGAGTTTCAAAAGATTTGAGAT
CGTTGACATCGTAGACAAGAACACAACAATCAGCACCTCGATAGAAAGCGGCTCCTAGACTGTGAAATCTCTTTGTAAAGTAACAG
ATTTATCTTCAATATGAAGCTCCTTGGTTACAAAATCTGCTCCGATCGTGGCCTTATATTGTCGGTTAAACTTCTTGTAAACGTAT
CTTAAGTCATAAATTTAGGTTTCTTACAAACACCGTATAAACATAGATCTAACTTAGAGCTTGAGCATAAAAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565521 RAB GTPase-like protein 7A [Arabidopsis thaliana] | 521 | 7e-051 |
| NP_001118357 RAB GTPase-like protein 7A [Arabidopsis thaliana] | 521 | 7e-051 |
| XP_002880403 hypothetical protein ARALYDRAFT_481052 [Arabidopsis lyrata subsp. lyrata] | 509 | 2e-049 |
| BAJ99564 predicted protein [Hordeum vulgare subsp. vulgare] | 451 | 9e-043 |
| XP_002458401 hypothetical protein SORBIDRAFT_03g032810 [Sorghum bicolor] | 444 | 6e-042 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q41640 Ras-related protein Rab7 | 430 | 1e-041 |
| Q43463 Ras-related protein Rab7 | 429 | 2e-041 |
| O24461 Ras-related protein Rab7 | 421 | 1e-040 |
| Q9XER8 Ras-related protein Rab7 | 412 | 1e-039 |
| Q40787 Ras-related protein Rab7 | 406 | 7e-039 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B3H781 Uncharacterized protein At2g21880.2 | 521 | 5e-051 |
| Q9SJ11 At2g21880 | 521 | 5e-051 |
| C5XIA1 Putative uncharacterized protein Sb03g032810 | 444 | 4e-042 |
| C0PA34 Putative uncharacterized protein | 438 | 2e-041 |
| Q40211 RAB7A | 437 | 3e-041 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G21880.1 ATRAB7A; GTP binding | 522 | 2e-053 |
| AT2G21880.2 ATRAB7A; GTP binding | 522 | 2e-053 |
| AT4G09720.1 Ras-related GTP-binding protein, putative | 439 | 9e-044 |
| AT4G09720.2 Ras-related GTP-binding protein, putative | 439 | 9e-044 |
| AT3G16100.1 ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C); GTP binding | 408 | 4e-040 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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