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Information for unigene UN56313

FASTA Sequence
Unigene ID: UN56313Length: 550 SSR 
GCATCAATCACTCTCTCACTAATCAAGAGAGTACTATGCAACTTCACTCCTGATGAGTTCTGTCCAGATCATGTACCTGGAGCTGT
CCTTGAAGAACTCAATGCTGTTGAGGTAACACAATCAATTCCAGAAAGTAAAAATTGAAAAATCATCTTAATTGTTTGTTGTTGTT
GTATATGGCAGAGCAATGGATCAGAAGAAGAAGAAGAAGCAAGCTTCTTCCCTTATGCAGCTTCTTCTGTTACTTACAAGCCTCCA
TCGACCATGGATGTAGCAGAGAAAGTTGCAGAGGCTGCGGGAAAGTTGTCGAGGAATGTGTCTATGATACAGAGGAAAGGGTACAC
GAGCGACGAGGAGCTTGAGGAGCTGGACTCTCCTCTTACATCTATTGTTGATAAAACGAGTGAGTTTAATGATTCTTCGACCTCAA
ATGCAAGATACAAGCTTCTTCGTCAAGTGTGGGCTTAGTTGAGTGAGAGTCATTTTGGAAACAAAGTAAAAAACTGTGAGCAATGT
GTTAGTTACTGTGAGTTGTCTCTATGGCTATTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879979 hypothetical protein ARALYDRAFT_483324 [Arabidopsis lyrata subsp. lyrata]3781e-034
AAM61597 unknown [Arabidopsis thaliana]3709e-034
NP_181761 nucleolar protein gar2-like protein [Arabidopsis thaliana]3709e-034
BAD93748 hypothetical protein [Arabidopsis thaliana]3709e-034
XP_002878171 hypothetical protein ARALYDRAFT_486231 [Arabidopsis lyrata subsp. lyrata]2345e-018

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q570M4 Putative uncharacterized protein At2g423203706e-034
Q8LF58 Putative uncharacterized protein3706e-034
Q9SLC7 Putative uncharacterized protein At2g423203706e-034
A2Q3E1 Putative uncharacterized protein2282e-017
B9SL81 Putative uncharacterized protein2173e-016

Arabidopsis top hits (Blast detail)Scoree value
AT2G42320.1 nucleolar protein gar2-related3714e-036
AT2G42320.2 nucleolar protein gar2-related3714e-036
AT3G57780.1 EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3024 Blast hits to 2177 proteins in 255 species: Archae - 2; Bacteria - 181; Metazoa - 988; Fungi - 289; Plants - 172; Viruses - 72; Other Eukaryotes - 1320 (source: NCBI BLink).2083e-017
AT5G06930.1 LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3144 Blast hits to 1363 proteins in 247 species: Archae - 2; Bacteria - 721; Metazoa - 835; Fungi - 297; Plants - 80; Viruses - 10; Other Eukaryotes - 1199 (source: NCBI BLink).1502e-010
AT3G01810.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1293 Blast hits to 384 proteins in 97 species: Archae - 2; Bacteria - 96; Metazoa - 212; Fungi - 99; Plants - 59; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink).1431e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members