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Information for unigene UN56382

FASTA Sequence
Unigene ID: UN56382Length: 723 SSR 
GGAGGAGTGGTCGCAGCACTCGTTCAACGCTTCGCGAGTATTGTCAGCAGCGACGAGGGCGATTGCGTCGTGGTGGAGGATTCGGA
TGTGAAGATTGTGAACGGAGGAGATGATTTGTTGCTGGATGATGATGAGGAGGAAGCGGTGGTGCGACGTGCGCGAGTCGGTAGGA
GGTTTGTGATTGAAGATGAGGAAGCGAGTGAGGAGGAGGAGGAGGAGGATGAGGTTGAGGAGGTTAGTTCTAGTGAAGAAGACGAA
GGTGGTGAAGGAGGAGACGGAGATGAGGATGTTGTTGGGAAGGCGTTGCAGAAGTGTGCTAAGATCTCGGCGGATCTTAGGAAGGA
GCTTTACGGTAGCTCTTCTGGTGTTACTACTTGTGATAGGTACTCTGAAGTGGAGTCTTCTACTGTGAGGATTGTCACTCAGACTG
ATATTGATGAAGCCTGTAAAGCAGAGGATTCTGATTTTCAGCCTATACTCAAGCCCTACCAGTTAGTTGGTGTTAATTTTCTTCTT
TTATTGTATAAGAAGGGAATTGAAGGAGCCATTCTAGCCGATGAGATGGGTCTTGGAAAGACTATACAGGCAATCACGTATTTAAC
TCTCCTAAATCACTTGAACAATGACCCTGGTCCTCATTTGGTTGTATGCCCTGCCTCTGTCCTGGAAAACTGGGAGAGAGAGCTCA
GAAAGTGGTGTCCATCGTTTACTGTACTTCAGTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875114 CHR19/ETL1 [Arabidopsis lyrata subsp. lyrata]9364e-099
ACQ90605 SWI/SNF helicase-like protein [Eutrema halophilum]9042e-095
ADQ43195 unknown [Eutrema parvulum]9042e-095
NP_178318 SNF2 and helicase domain-containing protein [Arabidopsis thaliana]8853e-093
CBI27512 unnamed protein product [Vitis vinifera]7341e-075

Swiss-Prot top hits (Blast detail)Scoree value
Q24368 Chromatin-remodeling complex ATPase chain Iswi2328e-019
Q6ZRS2 Helicase SRCAP2273e-018
P28370 Probable global transcription activator SNF2L12264e-018
Q6PGB8 Probable global transcription activator SNF2L12264e-018
C0H4W3 Probable ATP-dependent helicase PF08_00482255e-018

TrEMBL top hits (Blast detail)Scoree value
C7SI23 SWI/SNF helicase-like protein9041e-095
Q9ZUL5 Putative helicase8852e-093
B9S7A6 ATP binding protein, putative7185e-074
B9HVN6 Chromatin remodeling complex subunit7033e-072
B8AT32 Putative uncharacterized protein6219e-063

Arabidopsis top hits (Blast detail)Scoree value
AT2G02090.1 ETL1; ATP binding / DNA binding / helicase/ nucleic acid binding9074e-098
AT3G06400.1 CHR11 (CHROMATIN-REMODELING PROTEIN 11); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding2131e-017
AT5G18620.1 CHR17 (CHROMATIN REMODELING FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding2131e-017
AT5G18620.2 CHR17 (CHROMATIN REMODELING FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding2131e-017
AT3G12810.1 PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase/ nucleic acid binding2112e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members