Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN56409

FASTA Sequence
Unigene ID: UN56409Length: 729 SSR 
GGGAGCTTCATCATCATCATCATCATCATCGCTCTCTCTGTTCTCATCTAAGTCCTCCAATTCTGCGAAACCACTTTTCACTTCTC
ATCGTCAGATTCCATTATCAACAACGGGAGCTAAACTCTCTAAGTCGGAACGTTCCATGGCCACTTCCTCCGAGCCCAAGTCCATC
TATGATTTCACCGTCAAGGATGCGAAGGGGAATGATGTTGATCTAAGCACTTACAAGGGGAAGGTTCTCTTGATTGTCAACGTTGC
TTCTCAGTGTGGTTTGACCAATTCAAACTATACCGAGCTTGCACAGCTGTACCAGAAGTACAAAGATCATGGGTTTGAGATCCTTG
CGTTCCCCTGTAACCAGTTTGGGAATCAAGAACCTGGTTCTAATGAAGAGATTGTTCAGTTTGCCTGTACCCGTTTCAAGGCTGAG
TACCCGATCTTTGATAAGGTTGATGTGAATGGTGACACGGCTGCTCCAAGTGGAACTTCGCCAAGTTCTTGGTTGACAAAGATGGG
AATGTTGTGGACCGTTACGCCCCAACTACTTCCCCTCTCAGCATTGAGAAGGACCTGATGAAACTGTTGGGAGTTACTGCTTAAGC
AACGAAGAGGCGCTATTACTCAAATAAAAGCTCCTACAGTATTGTAATAAGCTGTCTATGTTCTTGAGCGTCTTTGGGATGAGTTG
TTTCCTGCTACTTAATTTTTCGTTTATCTACTTATGTGTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33626 unnamed protein product [Thellungiella halophila]7133e-073
XP_002874703 ATGPX6 [Arabidopsis lyrata subsp. lyrata]7052e-072
ACP28875 glutathionine peroxidase 6 [Eutrema halophilum]7025e-072
NP_192897 glutathione peroxidase [Arabidopsis thaliana]6802e-069
BAA24226 phospholipid hydroperoxide glutathione peroxidase-like protein [Arabidopsis thaliana]5592e-055

Swiss-Prot top hits (Blast detail)Scoree value
O48646 Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial6809e-071
O23814 Probable phospholipid hydroperoxide glutathione peroxidase4918e-049
P30708 Probable phospholipid hydroperoxide glutathione peroxidase4901e-048
Q9FXS3 Probable phospholipid hydroperoxide glutathione peroxidase4882e-048
Q9LEF0 Probable phospholipid hydroperoxide glutathione peroxidase4845e-048

TrEMBL top hits (Blast detail)Scoree value
D0PWB6 Glutathione peroxidase7024e-072
Q8W2G9 Glutathione peroxidase5375e-053
Q9SME6 Glutathione peroxidase5313e-052
A5Z282 Glutathione peroxidase (Fragment)5277e-052
Q6A4W8 Glutathione peroxidase5205e-051

Arabidopsis top hits (Blast detail)Scoree value
AT4G11600.1 ATGPX6 (GLUTATHIONE PEROXIDASE 6); glutathione peroxidase6809e-072
AT4G31870.1 ATGPX7 (glutathione peroxidase 7); glutathione peroxidase4522e-045
AT2G25080.1 ATGPX1 (GLUTATHIONE PEROXIDASE 1); glutathione peroxidase4334e-043
AT2G31570.1 ATGPX2 (GLUTATHIONE PEROXIDASE 2); glutathione peroxidase4227e-042
AT1G63460.1 glutathione peroxidase, putative4201e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members