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Information for unigene UN56480
| FASTA Sequence |
| Unigene ID: UN56480 | Length: 781 |
SSR | | GGATTTCTCATAACATCGTTTACACCATTTTGATACTCTTGCAAAAATGTCTTCACCAGCTGTTTTCGCCGCCGTCCCTGCCGTCG
CTCCCGTCTCCGTCGTCACCGCCGTCTCCGCAAACGCTGCCGTTTCCGCCGCCGCCGCCGTCCCCTACACCACCTTCGACTCACTC
CGACTTGGCAGGACCGGTCTTTGGTCGATAGACTCATCCGATTCTGGACTCGAATCGAATCTGCAGCTGATTCTTTTGTTAGCCGC
AGCCATGAATCAAGGACAGGTTTCGGAATCTGGAGAGCCGGAACTTGAATCCTCTCATCCGCAAGCTATGGATGCGGAGATATCTC
CTGAAGCCGACACAAACCCTGAAGCAGATGTCTTGGCGACTCCTACAATAGCAGGAAGTTGATTGGCCACAAAAAAGGGTTTGATC
AAATGGTTGGAGGAGGAGGAGGGTTTCTACCGTGGGCCTCTTTTTTTTTTTTGAGCAACATTCTCAGCTCTTATGACCATGGATGC
GTCTTGCCCACCAGGGTTAGCAGCAAGTCTTCGCATCTTGATACTCCCTGTCTCTCATCTCATACCGTGATTTGGTGGGTGTTGCC
TACACAGAGGAAGAGGCAAAGACAATGGCTGCTGAGATCGAGGTTGTTGACGGACCAAATGATGAAGGTAAGATGTTCCCCCGGCC
TGGTGAACACAGTGACTGCCTTCCTCAACCTTACTCCAATGAGTCAGCTGCAAGGTTCGCCAATAGATGAGCGTATCCACCTGACC
TAAGCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198897 ubiquinol-cytochrome c reductase cytochrome c1 subunit [Arabidopsis thaliana] | 345 | 2e-030 |
| NP_001154756 ubiquinol-cytochrome c reductase cytochrome c1 subunit [Arabidopsis thaliana] | 345 | 2e-030 |
| XP_002877032 AT3g27240/K17E12_6 [Arabidopsis lyrata subsp. lyrata] | 344 | 2e-030 |
| NP_189360 ubiquinol-cytochrome c reductase cytochrome c1 subunit [Arabidopsis thaliana] | 341 | 5e-030 |
| AAM65645 cytochrome c, putative [Arabidopsis thaliana] | 341 | 5e-030 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P25076 Cytochrome c1-1, heme protein, mitochondrial | 334 | 1e-030 |
| P29610 Cytochrome c1-2, heme protein, mitochondrial (Fragment) | 325 | 1e-029 |
| Q9D0M3 Cytochrome c1, heme protein, mitochondrial | 253 | 3e-021 |
| P08574 Cytochrome c1, heme protein, mitochondrial | 249 | 1e-020 |
| P00125 Cytochrome c1, heme protein, mitochondrial | 246 | 2e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FKS5 Cytochrome c1 | 345 | 1e-030 |
| Q8LA08 Cytochrome c, putative | 341 | 3e-030 |
| Q9LK29 Ubiquinol-cytochrome c1 reductase cytochrome c1-like protein | 341 | 3e-030 |
| Q0WNJ4 Cytochrome c1 | 340 | 4e-030 |
| A9PE48 Predicted protein | 336 | 1e-029 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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