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Information for unigene UN56502

FASTA Sequence
Unigene ID: UN56502Length: 754 SSR 
TTGCTGTGAGGGAGAGTGGAAAATGAATAATTTGTTGAATATCACAACCTTAGTTCTTTGTGTATGTCTCAGTTTTGGTTGTACAG
ATGGAGCTCAAAAAAGAAAGAGTGAAGAGGTTTCTTTCCACATAATTCAAGCCAGCTCTCTCTTTCCTTCATCATCATCATCATGT
GTTCTTTCTCCACGAGCATCTAATACCAGGTCGTCTCTTCACGTGGTGCACAGACACGGCCCATGCTCGAGTCTAAGCAGCAAGAA
AGCCAAGACAAGTCCCAACCATGACGACATCCTCAGACTCGACCAGGCGCGCGTAAAATCCATCCACTCGAAGCTTTCAAAGAAGC
TAACAGCCCAATACAGTGTCAGTCAAAGCCGCCAGTCAACGGATCTTGAGGCTAGAGACGGAAGCACACTCGGTTCAGGAAACTAC
ATCGTGACGGTCGGAATAGGGACGCCAAAACACAATCTATCTCTGGTCTTCGACACAGGCAGCGATCTGACGTGGACTCAATGCCA
GCCATGTGGTAGAAATGGAACTTGTTATCCACAAGAGGAGCCCATATTTAACCCTTCTTTGTCTTCTTCCTACTCCAACACCTCGT
GCTCATCCTCGCTTTGCGATTCTCTCACTTCCCAAGGTAACTACAGAAACTGCTCGGCTTCCACTGCATCTACGTGTAGGATACGC
GATACTCTTTCACCGTAGGGTTCTAGCCAAGAGAAATCACTTTAAACTCCGATGTCTTCACCGTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873476 hypothetical protein ARALYDRAFT_325615 [Arabidopsis lyrata subsp. lyrata]7205e-074
NP_196638 aspartyl protease family protein [Arabidopsis thaliana]7072e-072
XP_002873474 hypothetical protein ARALYDRAFT_909035 [Arabidopsis lyrata subsp. lyrata]5611e-055
AAN60226 unknown [Arabidopsis thaliana]5602e-055
NP_196637 aspartyl protease family protein [Arabidopsis thaliana]5602e-055

Swiss-Prot top hits (Blast detail)Scoree value
Q766C3 Aspartic proteinase nepenthesin-12112e-016
Q766C2 Aspartic proteinase nepenthesin-22032e-015

TrEMBL top hits (Blast detail)Scoree value
Q8S9J6 AT5g10770/T30N20_407177e-074
Q8H7H9 Putative uncharacterized protein5601e-055
Q9LEW3 Nucleoid DNA-binding protein cnd41-like protein5601e-055
Q9LEW2 Nucleoid DNA-binding protein cnd41-like protein5367e-053
B9IL97 Predicted protein5332e-052

Arabidopsis top hits (Blast detail)Scoree value
AT5G10770.1 chloroplast nucleoid DNA-binding protein, putative7175e-076
AT5G10760.1 aspartyl protease family protein5643e-058
AT3G20015.1 aspartic-type endopeptidase2273e-019
AT1G25510.1 aspartyl protease family protein2174e-018
AT5G33340.1 CDR1 (CONSTITUTIVE DISEASE RESISTANCE 1); aspartic-type endopeptidase2131e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members