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Information for unigene UN56592

FASTA Sequence
Unigene ID: UN56592Length: 737 SSR 
GGACAAAACACACTACTACTCTCTCACTCTTCCAACTGTTTCCCTCTTTCTCTCTCTCTCCTCAAAATCCGTCCAGATTATGTTTC
ACTTTCCCTTTTAATCAGGAAAAACTCTGTTTTTTCTTCTTTCACATTACCTTAATAATCTTCGTTCAAACAGTCTAATCCAAGTT
CAAGTGGTTTTCTCATCTCCAGTGGAGACTGAAGTCATGAGCTTTACAAGAAGACAAGTGTTCCTTGTTCTCTCTGTTTTAGCTTT
GACAATGCCGTTCTCAGCTGGAGTCACCAATCTACGAGATGTTTCGGCGATTAATAATTTGTATATTACATTGGGAGCACCATCTC
TATCACACTGGCTTGCTTTTGGAGGAGACCCTTGTGGAGAAAAGTGGCAAGGTGTGGTCTGTGATTCCTCAAACATCACAGAAATA
AGGATACCTGGCATGAAGGTGGGTGGAGGCTTAAGTGACACCTTGGCTGATTTTTCATCAATCCAAGTGATGGACTTCAGTAACAA
TCATATCTCAGGGACGATTCCACAGGCTTTGCCTTCTACCATCCGAAACCTATCTCTCTCTAGCAATCGATTCACTGGGAACATTC
CCTTTACATTGTCCTTTCTATCAGACTTGTCAGAGCTGTCGTTAGGAAACAATCTTCTGTCTGGAGAGATACCTGATACTTTCAGC
AGTTATCAAAGCTGACAAACTGGACTATCCTCTACGTACTAGAGGGCGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889850 hypothetical protein ARALYDRAFT_888407 [Arabidopsis lyrata subsp. lyrata]7761e-080
NP_172580 protein STRUBBELIG [Arabidopsis thaliana]7644e-079
AAD50000 Similar to protein kinases [Arabidopsis thaliana]7043e-072
XP_002521411 lrr receptor-linked protein kinase, putative [Ricinus communis]3981e-036
XP_002278213 PREDICTED: hypothetical protein [Vitis vinifera]3981e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q8RWZ1 Protein STRUBBELIG7642e-080
Q6R2K3 Protein STRUBBELIG-RECEPTOR FAMILY 33968e-038
Q06BH3 Protein STRUBBELIG-RECEPTOR FAMILY 13879e-037
Q6R2K1 Protein STRUBBELIG-RECEPTOR FAMILY 53367e-031
Q6R2K2 Protein STRUBBELIG-RECEPTOR FAMILY 43143e-028

TrEMBL top hits (Blast detail)Scoree value
C0LGE3 Leucine-rich repeat receptor-like protein kinase (Fragment)7643e-079
B9S5Z2 Lrr receptor-linked protein kinase, putative3987e-037
C0LGQ2 Leucine-rich repeat receptor-like protein kinase (Fragment)3961e-036
C0LGK6 Leucine-rich repeat receptor-like protein kinase (Fragment)3871e-035
B8B7G9 Putative uncharacterized protein3862e-035

Arabidopsis top hits (Blast detail)Scoree value
AT1G11130.1 SUB (STRUBBELIG); protein binding / receptor signaling protein serine/threonine kinase7642e-081
AT4G03390.1 SRF3 (STRUBBELIG-RECEPTOR FAMILY 3); ATP binding / kinase/ protein serine/threonine kinase3967e-039
AT2G20850.1 SRF1 (strubbelig receptor family 1); kinase3878e-038
AT1G78980.1 SRF5 (STRUBBELIG-RECEPTOR FAMILY 5); ATP binding / kinase/ protein serine/threonine kinase3367e-032
AT3G13065.1 SRF4 (STRUBBELIG-RECEPTOR FAMILY 4); ATP binding / kinase/ protein serine/threonine kinase3142e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

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