Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN56613

FASTA Sequence
Unigene ID: UN56613Length: 637 SSR 
GGGAGAAAGAGAAAGAGAGATAAGTCATCTATCCATCTGATTCCTTCGATCTGCTAAGAGATTTCTCTGGGTGAAAGAAGGAAGGG
AGGAAGGAAGGAAGGAGATAGATCTTCTTTGTCTGCATCATCATCATCATCATCGTCATCGCCAGGAGAAAGTAGAAAAAAAAACG
TTGTAGTGTCTAAAGGGAGGAGGAGTAAGATTCATACTGAGAGGAGGATAGAAAATGGCAGATGGGATGTCGAGTTTTTGGGGTCC
TGTGACCTCTACTATTGAGTGTTGTGAGAAGAACTACGCCTACTCCTCTTACATCGCTGAGTTCTACAACACCATCTCCGGTGTCC
CTGGAATCCTGCTCGCTCTCATTGGTCTTGTCAATGCCATTAGGCAACGCTTTGAGAAGAGGTTTAGCATCCTTCACATCTCCAAC
ATGATCCTTGCTATCGGCAGCATGCTCTACCATGCCACTTTGCAGCACGTGCAACAACAGAGCGATGAGACACCAATGGTGTGGGA
GATACTTCTCTACATGTACATCCTCTACTCTCCAGACTGGCATTATAGAAGCACCATGCCCACTTTTCTCTTCCTCTACGGTGCTG
CCTTCGCCGCAGTCCACGCTTACCTCAGGTTCGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567660 dihydroceramidase [Arabidopsis thaliana]7024e-072
XP_002869828 ATCES1 [Arabidopsis lyrata subsp. lyrata]7007e-072
XP_002331534 predicted protein [Populus trichocarpa]6471e-065
ABD28483 Alkaline phytoceramidase [Medicago truncatula]6442e-065
XP_002518399 alkaline phytoceramidase, putative [Ricinus communis]6442e-065

Swiss-Prot top hits (Blast detail)Scoree value
Q9NUN7 Alkaline ceramidase 32229e-018
P38298 Alkaline ceramidase YPC11852e-013
Q02896 Alkaline ceramidase YDC11815e-013
Q8TDN7 Alkaline ceramidase 11466e-009
Q8R4X1 Alkaline ceramidase 11323e-007

TrEMBL top hits (Blast detail)Scoree value
Q94IB9 Acyl-CoA independent ceramide synthase7023e-072
B9N8I5 Predicted protein6477e-066
B9RXD0 Alkaline phytoceramidase, putative6442e-065
Q2HVG4 Alkaline phytoceramidase6442e-065
B7FJX2 Putative uncharacterized protein6432e-065

Arabidopsis top hits (Blast detail)Scoree value
AT4G22330.1 ATCES1; catalytic/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds, in linear amides7022e-074

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members