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Information for unigene UN56665

FASTA Sequence
Unigene ID: UN56665Length: 606 SSR 
GGAGACCGAACACGAAAACAAAACACGAGTTTAAAGAGATTCATTTGAGTTGAAGGATTCAAGAATTCGAAAGAGCTGTCTCTCCT
TCGATTCCGGAATCATTTCTAGATCAGTAAGGTTGTATCACTGGTGGTTAAGTTAAAAGCATGTCCGATCATCTGAATTTATGTAC
GGATCGTCTCATAACCGCTGAGAGCTTGAAGTAGAAAAAGATGCTGATTCTTCTGGAGAGACTTGCACGAACTTGGCTTCTTCTTC
TTCTTCATCTACGAATGAAGCTGAGGTAGTAGCGAGGGAGTACTATGCCGTTGAGGAAGAGGAACCACTTCTCCAGTCCGTTGAGT
GCCGTATTTGCCAGGAGGAAGATACCACTAAGAACCTGGAGGCTCCTTGTAGTTGTAGTGGAAGTTTGAAGTATGCCCATCGCAAG
TGTGTTCAGCGTTGGTGTAATGAGAAAGGCGACATAACTTGCGAAATATGCCACCAGGCATATCAACCAGGATATACAGCACCTCC
GCCTCCTGATGAAACAATTATTCACATTGGTGACAACTGGGAGAATGGAGTTCCCTTGGACTTGAGTGACCCACGCATTCTGGCAT
GGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875846 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]5788e-058
NP_850668 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]5715e-057
NP_850667 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]5715e-057
NP_190339 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]5715e-057
ADA67984 RING-type E3 ubiquitin ligase [Brassica napus]5152e-050

Swiss-Prot top hits (Blast detail)Scoree value
Q86YJ5 E3 ubiquitin-protein ligase MARCH91394e-008
Q3TZ87 E3 ubiquitin-protein ligase MARCH91394e-008
A0JN69 E3 ubiquitin-protein ligase MARCH31351e-007
Q86UD3 E3 ubiquitin-protein ligase MARCH31351e-007
Q8BRX9 E3 ubiquitin-protein ligase MARCH31351e-007

TrEMBL top hits (Blast detail)Scoree value
A9CEI2 Uncharacterized protein At3g47550.25714e-057
Q3E6V0 At3g475505714e-057
Q9SN83 Putative uncharacterized protein At3g475505714e-057
D2KC47 RING-type E3 ubiquitin ligase5151e-050
Q9FJJ6 AT5g62460/K19B1_74845e-047

Arabidopsis top hits (Blast detail)Scoree value
AT3G47550.3 zinc finger (C3HC4-type RING finger) family protein5713e-059
AT3G47550.2 zinc finger (C3HC4-type RING finger) family protein5713e-059
AT3G47550.1 zinc finger (C3HC4-type RING finger) family protein5713e-059
AT3G47550.6 zinc finger (C3HC4-type RING finger) family protein5713e-059
AT5G62460.1 zinc finger (C3HC4-type RING finger) family protein4843e-049

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members