Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN56709

FASTA Sequence
Unigene ID: UN56709Length: 722 SSR 
GGAAAAGAAGCAAAAAAAGAAAAAAAAAAAGAGAGAGAGAGATGGAGGGGAAGAAGATAGGGAGGAGGTTGGAAGGAAAGGTGGCG
ATAGTAACGGCTTCGACGCAAGGGATCGGCTTCGGTATCATCGAGCGTTTCGGTCTCGAAGGCGCTTCCGTCGTCGTTTCTTCCCG
CAAGCAGGCCAATGTTGAGGAAGCAGTTGAAAAACTCAAATCCAAAGGGATTGATGCTTATGGAATCGTCTGTCATGTTTCCAATG
CTCAACATCGCCGAGATCTTGTCGAAAAAACTGTTCAGAAATATGGAAAGATAGATATCCTTGTCTGTAACGCCGCTGCTAATCCA
TCTACAGACCCAATCTTGTCAACCAAAGAAGCTGTCCTCGACAAGCTCTGGGAAATCAATGTTAAATCCTCTATACTTCTCCTTCA
GGATATGGCTCCTCACTTAGAGAAGGGTTCTTCTGTTATTTTCATAACTTCCATTGCTGGATTTCAACCACAAGGATCCATGGCTA
TGTATGGTGTCACTAAGACTGCTCTTCTCGGACTAACCAAGGCTCTTGCTGCTGAGATGGGTCCGGACACACGTGTGAACGCGGTT
GCTCCCGGTTTTGTGCCCACACACTTTGCTTCTTTCATCACTGGAAACTCCCAAGTGAGGGAAAGCATCGAAGAGAAGACTCTGCT
TAACAGTTGGGACACAGAGACATGGCTGCTGCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874790 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]10126e-108
NP_567300 dehydrogenase/reductase SDR family member 4 [Arabidopsis thaliana]10029e-107
XP_002264497 PREDICTED: hypothetical protein [Vitis vinifera]8683e-091
CBI35708 unnamed protein product [Vitis vinifera]8683e-091
ABZ02330 short chain alcohol dehydrogenase [Arabidopsis halleri]8568e-090

Swiss-Prot top hits (Blast detail)Scoree value
Q13268 Dehydrogenase/reductase SDR family member 24603e-045
Q9BTZ2 Dehydrogenase/reductase SDR family member 44551e-044
Q5RCF8 Dehydrogenase/reductase SDR family member 44532e-044
Q8WNV7 Dehydrogenase/reductase SDR family member 44352e-042
Q8SPU8 Dehydrogenase/reductase SDR family member 44334e-042

TrEMBL top hits (Blast detail)Scoree value
Q9S9W2 AT4g05530 protein10026e-107
B1P4A6 Short chain alcohol dehydrogenase (Fragment)8565e-090
B1P4A7 Short chain alcohol dehydrogenase (Fragment)8565e-090
B1P4C5 Short chain alcohol dehydrogenase (Fragment)8522e-089
B1P4C8 Short chain alcohol dehydrogenase (Fragment)8512e-089

Arabidopsis top hits (Blast detail)Scoree value
AT4G05530.1 IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1); binding / catalytic/ oxidoreductase10024e-109
AT3G05260.1 short-chain dehydrogenase/reductase (SDR) family protein2443e-021
AT1G54870.1 binding / catalytic/ oxidoreductase2273e-019
AT2G29340.2 short-chain dehydrogenase/reductase (SDR) family protein2183e-018
AT2G29340.1 short-chain dehydrogenase/reductase (SDR) family protein2183e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members