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Information for unigene UN56745

FASTA Sequence
Unigene ID: UN56745Length: 694 SSR 
GGGTTACGCCGAACCCAATTTCCTCCTAAATCTCAGCATCTTCCAATCTTCTCATATTACGATAGTTAGAGAGAGAGAGAGAGGAT
CGTGAGAGAGATTACCATCACAATCGAAATCGCTTTACAGAACCTCCGATTTTAAAAAAGTGATCTTCAAGTTAAAGCCCTCAAAT
AGTAACAAAGTAGATTTTCAACAGCCTCCTAATAAAGATTGGTTGATCTCTTTCGCTATAATACACAGTGTTTAGCAAAAAGATGG
CTGGTGTAAAGCGAAAATTAAGTCCAGAGTCAGATCCTCACGCTCTTCACAAAGTACTGGATGAGGTCTCATGCCCTGTTTGCATG
GATCACCCTCACAATGCTGTTCTCCTCCTCTGCACCTCTCACGACAAAGGTTGCAGGTCTTACATCTGTGACGCCAGTTACCGTCA
CTCCAATTGCCTCGACAGGTTCAAGAAACTCCACTCCGAACCCCCAACTGATCCCAACCCCAATCCCGACCCGAACTCTGCCTCAA
GGCCAAACATTAACCAAGTCGCTGTTAGGGAAGAGGAGCAAGCAGAGGAAACTACGAATTTGAAATGTCCTCTTTGCCGTGGTACT
GTTTTAGATTCAAGGTGGTAGAAGAAGTGAGAAGCTATCTCGACATGAAGAGCCGAGCTGCTCGCGAGAGTCTTGCTCGTTCACGG
GAACTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883554 hypothetical protein ARALYDRAFT_479993 [Arabidopsis lyrata subsp. lyrata]4167e-039
NP_189118 uncharacterized protein [Arabidopsis thaliana]3997e-037
CBI37270 unnamed protein product [Vitis vinifera]3541e-031
ACU24091 unknown [Glycine max]3405e-030
XP_002301572 predicted protein [Populus trichocarpa]3012e-025

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LRY5 AT3g24740/K7P8_33995e-037
C6TME9 Putative uncharacterized protein3403e-030
B9GTE6 Predicted protein3011e-025
B9S551 Putative uncharacterized protein2992e-025
B6T7N4 Putative uncharacterized protein2893e-024

Arabidopsis top hits (Blast detail)Scoree value
AT3G24740.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT3G25910.1); Has 135 Blast hits to 134 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3993e-039
AT3G24740.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT3G25910.1); Has 135 Blast hits to 134 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3993e-039
AT3G25910.1 zinc ion binding2131e-017
AT1G68140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT4G08460.2); Has 145 Blast hits to 136 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1961e-015
AT1G68140.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT4G08460.2); Has 157 Blast hits to 148 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4; Plants - 143; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).1961e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members