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Information for unigene UN56751
| FASTA Sequence |
| Unigene ID: UN56751 | Length: 777 |
SSR | | GGACCTCGTGAGCGATAGTACCTGAACCCTAGCTGTGGTAGAAACAAAATCAAAACTTTTCTCGAGGAGACAAACAAAAATCTTTC
TCTTTTTTCGCAGTGGAAAGAAAGAAAAAAGATGCAGAATCCGAGGTTTAGGCAACAACAACAACAACAACAACAAGCTATGATGC
AGCAGCAAGCTTTGATGCAACAACACTCTCTTTACCATCCTGGTGTCTTGGCCCCTCATCAGTTAGAGCCTGTTCCAAGTGGAAAC
CTTCCTCCTGGTTTTGATCCCAGCACTTGCCGTAGCGTGTATGTTGGAAACATCCATATACAGGTCACCGAGCCTCTTCTTCAAGA
GATTTTTACCAGCACCGGTCCTGTTGAAAGCAGTAAACTCATCAGAAAGGATAAGTCATCATATGGATTTGTTCACTACTTTGACC
GAAGATCTGCTGCTCTAGCTATACTTTCTCTCAACGGAAGACACCTGTTTGGACAGCCTATCAAAGTCAACTGGGCTTATGCCACT
GGCCAGAGGGAAGATACATCCAGTCACTTTAACATTTTTGTTGGAGACCTCAGTCCAGAGGTTACTGACGCTGCATTATATCAAAT
CTTTTCTGTTTTTTCCACTTGTTCGGATACAAGAGTTATGTGGGATCAAAAACTGGGCGTTCAAGAGCTTTGGGTTTGTTCCTTCC
GTAATCAACAGATGCTCAACTGCATAAATGAGATGAATGGTAAGTGGTTAAGTAGCAGACAGATAGATGCACTGGGCTACAAAGTG
CTA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188026 RNA recognition motif-containing protein [Arabidopsis thaliana] | 966 | 2e-102 |
| AAM65229 oligouridylate binding protein, putative [Arabidopsis thaliana] | 966 | 2e-102 |
| XP_002882868 hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp. lyrata] | 961 | 6e-102 |
| XP_002892947 hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp. lyrata] | 860 | 3e-090 |
| XP_002894477 hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp. lyrata] | 860 | 3e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q01085 Nucleolysin TIAR | 311 | 6e-028 |
| P70318 Nucleolysin TIAR | 240 | 1e-019 |
| P31483 Nucleolysin TIA-1 isoform p40 | 168 | 2e-011 |
| P52912 Nucleolysin TIA-1 | 168 | 2e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LAP3 Oligouridylate binding protein, putative | 966 | 1e-102 |
| Q9LJH8 AT3g14100/MAG2_5 | 966 | 1e-102 |
| B3H4Q3 Uncharacterized protein At1g17370.2 | 859 | 3e-090 |
| Q9LQI9 At1g17370 | 859 | 3e-090 |
| B9N7F5 Predicted protein | 846 | 9e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G14100.1 oligouridylate-binding protein, putative | 966 | 7e-105 |
| AT1G17370.1 UBP1B (oligouridylate binding protein 1B); mRNA 3'-UTR binding | 859 | 2e-092 |
| AT1G17370.2 UBP1B (oligouridylate binding protein 1B); mRNA 3'-UTR binding | 859 | 2e-092 |
| AT1G54080.1 oligouridylate-binding protein, putative | 846 | 5e-091 |
| AT1G54080.2 oligouridylate-binding protein, putative | 831 | 3e-089 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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