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Information for unigene UN56779
| FASTA Sequence |
| Unigene ID: UN56779 | Length: 800 |
SSR | | AGGTAAAGAAGAGGTGACATAAAATAATCAAAGATATCAGTCAAGTGACAATGATTGATGCATCATAACCTGTAACGTGCAACCTA
AGTAATCAAGGAACACTAGTAGTCTGTGTGTGTGTGTGTGTGTGTGTATGAGCCTCTATATACCTCATTTACAAAGAAGAGAGAGA
GAGAGAGAGAGAGGAAGCGAGGTCTGGAATTCAAAGATGTCTTCTGCACAAGGGACAAGAAGCATGCCTGCAAAGCCACTTGTCGA
TGCATGGTAGGTGGAACATATGATGGCACTGCGGCAAAATTCTAACAGTCTCTCCCACCTGAAAGTCCTGAAGGCAGACAGAGCAA
GAGACCATCTCCCCTGAGCTATCTGTGATTCGGACCTTTGGGATCCTGTCGAGAGAATCCCCAGTGAGACCATTTGAAATAGCAGT
GTCGAAGATGTCAGTTTGGTCGGGGAACTGTGATTCCACGGCTCCCATCTGGTTCTGGACCGCACTTAGCATTGCAGGACCAATAC
GCTCACGAACTAGCCTCCCGCTCAAAAGGCTAGCAATGACATCAATCAAGTAGAGAAGGCAAGCAATTCCAGACTGATCGGATTGC
CAGAGGAGGAGAGAAGATCCAAGGACATCGATGGAGAAGACAGCACCAGAAATAGCACCAACGGCGGCTCCTCTGATGAAACCACT
CTCTGTTTCTTGGCCGATCAGAGCCCCTGTAAAGGCTCCTAGCAAAGTCCCCACTAGAGCGAAGACGAAGGTGAAGAGAGCGGAGA
ATAGGTTGGCGAGGAGCGAAGAAATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_201408 NEP1-interacting protein-like 1 [Arabidopsis thaliana] | 907 | 1e-095 |
| XP_002866776 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 907 | 1e-095 |
| XP_002530631 RING-H2 finger protein ATL4M, putative [Ricinus communis] | 821 | 1e-085 |
| XP_002327636 predicted protein [Populus trichocarpa] | 820 | 1e-085 |
| XP_002331758 predicted protein [Populus trichocarpa] | 802 | 2e-083 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FKX5 RING-H2 finger protein ATL5P | 907 | 5e-097 |
| Q8GT75 RING-H2 finger protein ATL4M | 754 | 3e-079 |
| Q8GT74 RING-H2 finger protein ATL2B | 748 | 1e-078 |
| Q8LBA0 RING-H2 finger protein ATL1Q | 402 | 2e-038 |
| Q9SL78 Putative RING-H2 finger protein ATL2D | 190 | 7e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SXB2 RING-H2 finger protein ATL4M, putative | 821 | 7e-086 |
| B9MXB1 Predicted protein | 820 | 1e-085 |
| B9N918 Predicted protein | 802 | 1e-083 |
| A8E124 NEP1-interacting protein | 797 | 4e-083 |
| C6SY09 Putative uncharacterized protein | 784 | 1e-081 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G66070.1 zinc finger (C3HC4-type RING finger) family protein | 908 | 4e-098 |
| AT4G35840.1 zinc finger (C3HC4-type RING finger) family protein | 755 | 2e-080 |
| AT2G17730.1 zinc finger (C3HC4-type RING finger) family protein | 749 | 1e-079 |
| AT5G66070.2 zinc finger (C3HC4-type RING finger) family protein | 469 | 3e-047 |
| AT1G74410.1 zinc finger (C3HC4-type RING finger) family protein | 396 | 8e-039 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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