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Information for unigene UN56781

FASTA Sequence
Unigene ID: UN56781Length: 647 SSR 
GTATCAGATCGTGATTTTTTTCCCGGACTTACCACCACCCTTACTAACAAGAGAAGAATCCTCAAGTGACCTTTTTGAAGTATCCT
TTTCCTCAATACGCAGAGGCTTCTCTTTGTGCGTATCTTCATTGTCATCCTCGTCATGGCCAGAATCAACGTATTCATCCCCTTGA
CTATCATGAGAATCAATGGCATCATCATCATCATTAGGGTCCACATCAACAGCCTCGTGATCCCCACCACCCTTGACAAGGGAAGC
TTGATACTCAGCTTCATACTTGTTTAATTCGTCCCGTCCCGCTTCATTGTAGAAACCACCATTCCCCTTAAAATCTAAACCTTTCA
CAGGAGGAACCTTTTTCACTTCAACAGATTTATTATCTTCAGATTGATGCTCTACTTCACCTTCATTATAGTCATCATCTCGTCGT
CTGTCATCCTTATCCCAATACCTCGAGTCTCGTCCATGAACCACTGAGCCGTGACCAAACTCAAGCACCTTCTCAGGGTCGATTCT
CGTCACATTCGCCAGAAAATCACCGTCGTAAGAATCTTTATCGTCGTAGCCTTTGTTAGTAAAGCCAGAGATGTAATAGTAAGCTA
GAACAGTGAGGACGAGCACAAGGGAGATAACAAAGACAACGGAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF79257 F12K21.12 [Arabidopsis thaliana]6121e-061
NP_174715 uncharacterized protein [Arabidopsis thaliana]6121e-061
XP_002872453 hypothetical protein ARALYDRAFT_911228 [Arabidopsis lyrata subsp. lyrata]6012e-060
NP_192701 uncharacterized protein [Arabidopsis thaliana]5922e-059
XP_002893826 hypothetical protein ARALYDRAFT_891055 [Arabidopsis lyrata subsp. lyrata]4292e-040

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LNL6 F12K21.126128e-062
Q9SST1 Putative uncharacterized protein AT4g096305974e-060
B9SLF7 Putative uncharacterized protein3942e-036
B9MW74 Predicted protein3691e-033
A5BHD2 Putative uncharacterized protein2605e-021

Arabidopsis top hits (Blast detail)Scoree value
AT1G34550.1 EMB2756 (EMBRYO DEFECTIVE 2756)6125e-064
AT4G09630.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: EMB2756 (EMBRYO DEFECTIVE 2756) (TAIR:AT1G34550.1); Has 2910 Blast hits to 2214 proteins in 235 species: Archae - 17; Bacteria - 119; Metazoa - 666; Fungi - 192; Plants - 194; Viruses - 70; Other Eukaryotes - 1652 (source: NCBI BLink).5973e-062
AT2G19480.1 NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding1206e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members