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Information for unigene UN56822

FASTA Sequence
Unigene ID: UN56822Length: 833 SSR 
GGGTTTAATCTGCATCATTATTAAATATTGCCTGCAAAGACATATGAAGCTACTTTACAAGAGCAACATTTATATTGTCTTTGATA
CATCATCTTCTTCTTCTTCTTCTATCAAACCCCAAAGAGAGAGAGAATACATAACTTTGAAAAGAGGGAAATGAATCAAAATAGCT
TAAATACCCCATCGAAAAGAAGCTTACTTTACACAAAAACCAGACCAGGTCAGACTTAAAATCCCATTTGAATACCCACCACCCTT
CTTAGAACAAACAAAAGATCATTATGGAAACTGAAAAAACATAAAAGTCTTTGCTAATTGATTGTGCCTTTTACTTACTAGTAGTT
GGATTAACCAGAAGAGACTGCTAATGTTGCTGTGATTGCATCTGGAGATGAATTTGCCTTCCCTGCTTCTTTGCTTCCCTCCTCCA
AGCGGACGACTTGAGCAAAACTTTTAGACATGTTCTTGATGAAGTCTGTCTGCAATGCAGCAGCAGCCGCAGGTTTATGTTCGTTT
TCTCCTCCTCCTCCTGCAGATGGCAAGCTTGGCTGTCTTCTTGCCTTCCGTTCTTGTATTATCTTCTCCCTCTCTTCGTAAAACCC
AAAATCATCCAAGATTGAAGTCTCAGCATCATAGTTCTTGAAAATCTTCAGCATCTCAATGCCTTGTTCTAGTTTCACTTCTTGAG
TGTCTCGACTGTTCGTCACAGGCTTATTGTCATTGTTTTCCAATATAATGTGGCGGAACTGACTGTTTGGAACATCTTTGATGATG
TGCCACTTCACCGGGAACTGTCCGTTCCATTTGTCTTGTTGCCAGTAATCAACGCTCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882804 hypothetical protein ARALYDRAFT_478675 [Arabidopsis lyrata subsp. lyrata]7483e-077
BAB02516 unnamed protein product [Arabidopsis thaliana]7313e-075
NP_187912 uncharacterized protein [Arabidopsis thaliana]7313e-075
XP_002330450 predicted protein [Populus trichocarpa]5728e-057
XP_002310346 predicted protein [Populus trichocarpa]5602e-055

Swiss-Prot top hits (Blast detail)Scoree value
P59326 YTH domain family protein 12939e-026
Q9BYJ9 YTH domain family protein 12911e-025
Q0VCZ3 YTH domain family protein 22911e-025
Q9Y5A9 YTH domain family protein 22911e-025
Q4R5D9 YTH domain family protein 22911e-025

TrEMBL top hits (Blast detail)Scoree value
Q0WR25 Putative uncharacterized protein At3g130607312e-075
Q9LDZ8 Gb|AAF35955.17312e-075
B9N5D4 Predicted protein5726e-057
B9HG69 Predicted protein5601e-055
A5B5J0 Putative uncharacterized protein5512e-054

Arabidopsis top hits (Blast detail)Scoree value
AT3G13060.2 ECT5; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: YT521-B-like protein (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: ECT2; protein binding (TAIR:AT3G13460.1); Has 1007 Blast hits to 965 proteins in 147 species: Archae - 0; Bacteria - 8; Metazoa - 528; Fungi - 103; Plants - 235; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink).7373e-078
AT1G27960.1 ECT9 (evolutionarily conserved C-terminal region 9)4058e-040
AT1G79270.1 ECT8 (evolutionarily conserved C-terminal region 8)3969e-039
AT1G55500.1 ECT43942e-038
AT5G61020.1 ECT33888e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members