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Information for unigene UN56887
FASTA Sequence |
Unigene ID: UN56887 | Length: 786 |
SSR | | CTCGGAATTTATTTTTATTCATTTTATAAGTCGGATAGATTGTTGAGAAAATGAAGCTTAGCTCAAATAAAAAAGCAGTTATTCGA
GTAGCCATTAATTTAGATGGGAGATCAAGAGTAGAGAGCAAGGTGATGAAGACGGTGAAGATGATTATGATATATTGGCTCAAACT
GGATGAGCGGGAGAGAGGCCGAACTGGAGTTCCCAAAGCTCAAAAGCTCCCTTAACAAAGTCATAATAGCCTCCCTTCAAAGCAAG
TGTTCCTTTGACAACTCCTTCCCTCACAAATGGGTATGTTAATAGGTTTGCTAGTGACGCATTCACTGCCTCCCTTTCACATCGGC
CACATTGGTCTTCAAATGCTGAACTTTCAGCTTCTGCCAAAACTTTTGACTTTGCTGGCAAACAGATTTTTACCCAATCCTCTATG
AAATCAGTGGAGTTGTTTCCGTCAAGAGCAAATGACATAAGTCCCTTGATGCCACCACATGCACTGTGACCTATTATCACAATGTT
CTCGACCTACATTCATAAATTCCAATAAACATCAGTTCATACGTATTTATTTGTATACATGTATTGTTGTGATATACACAAACAAA
AACGACCCAGCCCATATATCTAACCCACGTCATTGGACGGGCCCGTTACATATCGCCACAGCTAGCCCATTTACATATGCCTATGA
ATTTACAATACAGTTTTCTCATGACACCAGTTTCAGAAAAAAATCTCAGAACAATATACTGTGTATATTTATATACATATAGAGAG
AGAGAGATGCCT
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GenBank top hits (Blast detail) | Score | e value |
NP_568303 carbonic anhydrase 2 [Arabidopsis thaliana] | 583 | 4e-058 |
NP_974782 carbonic anhydrase 2 [Arabidopsis thaliana] | 583 | 4e-058 |
BAH20249 AT5G14740 [Arabidopsis thaliana] | 583 | 4e-058 |
XP_002871629 hypothetical protein ARALYDRAFT_488319 [Arabidopsis lyrata subsp. lyrata] | 583 | 4e-058 |
AAA50156 carbonic anhydrase [Arabidopsis thaliana] | 564 | 6e-056 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P42737 Carbonic anhydrase 2, chloroplastic | 583 | 2e-059 |
P27140 Carbonic anhydrase, chloroplastic | 546 | 4e-055 |
P16016 Carbonic anhydrase, chloroplastic | 460 | 3e-045 |
P27141 Carbonic anhydrase, chloroplastic | 445 | 2e-043 |
P17067 Carbonic anhydrase, chloroplastic | 439 | 9e-043 |
TrEMBL top hits (Blast detail) | Score | e value |
B9DHN2 Carbonic anhydrase (Fragment) | 583 | 3e-058 |
Q3E9H5 Carbonic anhydrase | 583 | 3e-058 |
Q56WK1 Carbonic anhydrase | 546 | 5e-054 |
Q56X90 Carbonic anhydrase | 546 | 5e-054 |
Q6Q9W7 Carbonic anhydrase | 527 | 9e-052 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G14740.1 CA2 (CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding | 584 | 1e-060 |
AT5G14740.2 CA2 (CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding | 584 | 1e-060 |
AT5G14740.4 CA2 (CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding | 567 | 1e-058 |
AT5G14740.3 CA2 (CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding | 560 | 8e-058 |
AT3G01500.3 CA1 (CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion binding | 547 | 3e-056 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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Unigene Members | |
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