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Information for unigene UN56932

FASTA Sequence
Unigene ID: UN56932Length: 821 SSR 
GGTTCAAGAACTCAATAGTTTAAATACATATATGGGCAGAAACAAGGAACAGAGGCAAAATGCTTGCCCTCAACCTCAAGAGTCTT
TTAGGTCAAATCCTACACCCAATCCAAAGATAGAATAATATCCGAGTTCCATGTTAGGGAGAAATCATGGACTGTTTTTGTTCTAA
TCACATATTATTCATAAATACTAATAATACTAACAAAGAATTGATTAGTAAAAGATTATTACTCCAAGAGCTTGCTGATGCTTCAA
GATCCATTGTTTGGCCTTTTGTTGGAGACAACATCAGAAAATACATGAAGAAGCTGCTCAGCAAGGCTGCTTGGATCATCTTCTAG
TGTCTGCACAAATGTGCTCACAACAGATTGCTCTTGAGCAGTCGAGCTCAAGCCGAACCATGTCAAGAACCTGATCCTGAATGTTT
TCTGGATGTGGCCTTCCCTCTCCAGCCACCTAACCACCTTCATGCATTTCTCAAGAGTGTCATCAATCGGCGAACTGTCACACTCG
TTGTTCTCTGATTCGTGACTGTTTGAATCTGCTTTCCTCTTCCTAGTCGTGAGGAAATCAAACTCGGGATCATCACCACTTCCATC
TGATTTCACCATCTTCTGTGTACCGTTAGACACTGTATCATCATCATCATCATTATAGTTACCATTACCGTTACCGTTACCAACAT
CAGCCTCAGCTAGTGAATCCAACGGCACTCCATTGTCTTCACCTCCAGAAGAATCAAGTTGAGTGAACTCCTCATTCAAGTCTGGT
ACTGAAACTACATTTAGTCAACCCAAGTGGTCGTCGAGGTGGCACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885646 hypothetical protein ARALYDRAFT_479953 [Arabidopsis lyrata subsp. lyrata]6821e-069
NP_189087 Fibronectin type III domain-containing protein [Arabidopsis thaliana]6642e-067
CAN81221 hypothetical protein VITISV_003834 [Vitis vinifera]3083e-026
CBI20941 unnamed protein product [Vitis vinifera]2922e-024
XP_002281346 PREDICTED: hypothetical protein [Vitis vinifera]2781e-022

Swiss-Prot top hits (Blast detail)Scoree value
Q9FIE3 Protein VERNALIZATION INSENSITIVE 31844e-013

TrEMBL top hits (Blast detail)Scoree value
Q9LHF5 Emb|CAB52464.16641e-067
A5BJM1 Putative uncharacterized protein3082e-026
B8BM95 Putative uncharacterized protein2723e-022
B9RPB3 Putative uncharacterized protein2723e-022
Q2QPD5 Fibronectin type III domain containing protein, expressed2723e-022

Arabidopsis top hits (Blast detail)Scoree value
AT3G24440.1 VRN5 (VERNALIZATION 5)6647e-070
AT4G30200.1 Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.2032e-016
AT4G30200.3 Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.2032e-016
AT4G30200.2 Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.2032e-016
AT2G18870.1 VEL3 (VERNALIZATION5/VIN3-LIKE)2014e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  100%

Unigene Members