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Information for unigene UN56987
| FASTA Sequence |
| Unigene ID: UN56987 | Length: 561 |
SSR | | CAATGCATGAACAAAAAAGAGGTAACGTAACCCTAAACTTCCTCAAAGACAAACTTAAAACTCTTTAAAAACGCCAAAAGCTGAAG
TCTATAAGCTGTAAAGGAGCCAAAAAGGCTCTCTTTTAGTTCTTCTTGCTCTTCGATTTCCCAAACAACGTCTTGGCCAAATGTGT
TCCCTCGAGCCACTCGTCCAGTGATGCGTCGGTAGACCTTGTTCCTACTTCCACCTTTGACACCTTTTTGGTTTTCTTAGTGAGAC
GCTGAACTTGGCTGTAAGCCCATAGACCGAGGAGGAGGAGGAGAGCAATCCCAAGTGTGATAAGGAAGACAGACTCACCGCTGAGA
AGACCTCCAGATTCAACAACCTCAATGGTTCCATTGTAGAAAACATTCTGGTATGCCTTCCCTTCCACGTCGTAGATAACATAACC
CACCAGATCAAATGCTCCAGGCTGCAGGTACTGGCTGACAGCAAAGACATAGGAGAATGTTGCTTGAACAGAAAATGGGATGGAGG
CATTGTTGATTCTCAGCACGGTAAGATTCTGAACCAACATCTTAT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002878536 hypothetical protein ARALYDRAFT_480966 [Arabidopsis lyrata subsp. lyrata] | 660 | 2e-067 |
| AAM63845 putative signal sequence receptor, alpha subunit (SSR-alpha) [Arabidopsis thaliana] | 651 | 2e-066 |
| NP_565498 translocon-associated protein subunit alpha [Arabidopsis thaliana] | 647 | 7e-066 |
| AAA21820 alpha-subunit; putative [Arabidopsis thaliana] | 647 | 7e-066 |
| BAJ84936 predicted protein [Hordeum vulgare subsp. vulgare] | 500 | 8e-049 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| P45434 Translocon-associated protein subunit alpha | 647 | 4e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q8LC49 Putative signal sequence receptor, alpha subunit (SSR-alpha) | 651 | 2e-066 |
| Q5M727 At2g21160 | 647 | 5e-066 |
| A2YGZ9 Putative uncharacterized protein | 496 | 2e-048 |
| Q5Z9P6 Os06g0715500 protein | 496 | 2e-048 |
| B9STC6 Translocon-associated protein, alpha subunit, putative | 494 | 3e-048 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT2G21160.1 translocon-associated protein alpha (TRAP alpha) family protein | 648 | 3e-068 |
| AT2G16595.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: translocon-associated protein alpha (TRAP alpha) family protein (TAIR:AT2G21160.1); Has 191 Blast hits to 191 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 121; Fungi - 18; Plants - 38; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | 386 | 7e-038 |
| AT2G21160.2 translocon-associated protein alpha (TRAP alpha) family protein | 324 | 1e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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