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Information for unigene UN57076
| FASTA Sequence |
| Unigene ID: UN57076 | Length: 739 |
SSR | | GGGTTGGTCCGAGAACTCCTCTGCGTATCCTCTAGATCTGTTCGTTTTCGAACATCTGTTAATCACCAAATCTGAGATCTATCGAT
CTCTCCTTGTCCGTATGCTGTGTCACCACCACCACCACCAGATCTGCAACTCTCATTATGGCGGAGACTCTCAAAGAAGATTCGAT
CACGATTCGCGAGGTCTGGAACGACAACCTCCTCGAGGAGTTCGCGCTGATCCGCGAGATCGTCGACAAATACAACTACATCGCCA
TGGACACCGAGTTCCCAGGCGTCGTCCTCAAGCCCGTCGAGACCTTCAAACGCAACAACGACCTTAACTACCGCACCCTCAAAGAA
AACGTCGACCTCCTCAAACTCATCCAGCTCGGCCTCACCTTCTCCGACGAGCACGGCAACCTCCCCACCTTCGACGACAAGTTCTG
CGTCTGGCAGTTCAACTTCCGCGAGTTCGACGTCGGGGAAGACATCTACGCGACCGAGTCCATCGAGCTTCTCCGCCAGTGCGGGA
TCGATTTCAAGAAGAACGTCGAGAGAGGCATCGACGCGGTCCGGTTCGGGGAGCTGATGATGTCATCCGGGATCGTGCTTAACGAT
TCCATCACGTGGGTTACGTTCCACGGAGGTTACGATTTCGGGTATCTCGTCAAGCTTCTGACTTGCAGGAGCTTCCCTTCGAGCAG
TCCGATTTCTTCAGCTCCTGTTTGTGTATTTCCCCACGGTTTACGATATCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAK92792 putative CCR4-associated factor [Arabidopsis thaliana] | 824 | 4e-086 |
| NP_196657 putative CCR4-associated factor 1-10 [Arabidopsis thaliana] | 824 | 4e-086 |
| XP_002871445 hypothetical protein ARALYDRAFT_487926 [Arabidopsis lyrata subsp. lyrata] | 824 | 4e-086 |
| XP_002324905 predicted protein [Populus trichocarpa] | 741 | 2e-076 |
| XP_002515442 ccr4-associated factor, putative [Ricinus communis] | 740 | 2e-076 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LEU4 Probable CCR4-associated factor 1 homolog 10 | 824 | 2e-087 |
| Q9SKZ2 Probable CCR4-associated factor 1 homolog 7 | 670 | 1e-069 |
| Q9SAI2 Probable CCR4-associated factor 1 homolog 6 | 652 | 2e-067 |
| Q9LXM2 Probable CCR4-associated factor 1 homolog 9 | 506 | 1e-050 |
| Q9FMS6 Probable CCR4-associated factor 1 homolog 11 | 488 | 2e-048 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9IL41 Predicted protein | 741 | 1e-076 |
| B9RNX3 Ccr4-associated factor, putative | 740 | 2e-076 |
| B9SMT7 Ccr4-associated factor, putative | 732 | 1e-075 |
| B7FJ18 Putative uncharacterized protein | 730 | 2e-075 |
| B9HAV1 Predicted protein | 726 | 6e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G10960.1 CCR4-NOT transcription complex protein, putative | 824 | 2e-088 |
| AT2G32070.1 CCR4-NOT transcription complex protein, putative | 670 | 1e-070 |
| AT1G80780.1 CCR4-NOT transcription complex protein, putative | 652 | 2e-068 |
| AT1G80780.2 CCR4-NOT transcription complex protein, putative | 652 | 2e-068 |
| AT1G15920.2 CCR4-NOT transcription complex protein, putative | 539 | 2e-055 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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