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Information for unigene UN57169
| FASTA Sequence |
| Unigene ID: UN57169 | Length: 707 |
SSR | | GAAGACTTTCCATGATTTGAATGGGAAGCAAGTAGAGGTTAAGAGAGCTCTTCCTAAAGATGCTAATCCTGGGGTAGCCGGCGGTG
GTGGTGGTGGTCGTGGCGGTGGTGGTGGTTTCCCTGGGTATGGTGAGGGTCGTGTTGATTCAAGTAGATACATGCCGCCTCAAAAC
GCTGGAGGAAGCGGTTATCCTCCTTATGGTGCTGGTTATGGTTATGGCAGCAACGGTGTAGGTTATGGGGGTTTTGGAGGGTATGG
GAATCCATCTGGTGCGCCTTATGGGAACCCTGGTGTGACTGTCCCTGGAGCTGGGTTTGGAAGTGGTCCAAGAAGTTCGTGGGGAG
GTCAAGCACCGTCTGGTTACGGTAACGTGGGATATGGAAATGCTGCTGCTCCTTCTGCTCCGTGGGGCGGTTCTGGTCCCGGTTCA
GCAGTGATGGGTCAAGGAGGTGCGTCTGCAGGTTACGGCGGTCAAGGTTATGGATATGGTGGGAATGATTCCTCTTATGGGACTCC
ATCTGGTTATGGTGCAGTCGGTGGGCGGCCTAACAGCCTTGGCGGTGGCTATGCTGATGGTTTAGATGGCTATGGGAATCACCAAG
GAAACGGGCAAGCTGGTTATGGCGGTGGTTATGGAAGCGGTAATCAAGCTTTACAACAGTGATTGGAGGAAGAAAGACTACCACAT
TGTGGTCTTTATCTTTCTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_180899 RNA recognition motif-containing protein [Arabidopsis thaliana] | 964 | 2e-102 |
| XP_002879449 hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp. lyrata] | 962 | 4e-102 |
| BAH20318 AT2G33410 [Arabidopsis thaliana] | 523 | 3e-051 |
| EAZ16269 hypothetical protein OsJ_31729 [Oryza sativa Japonica Group] | 312 | 9e-027 |
| AAP54039 transposon protein, putative, CACTA, En/Spm sub-class, expressed [Oryza sativa Japonica Group] | 311 | 1e-026 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P09789 Glycine-rich cell wall structural protein 1 | 278 | 4e-024 |
| P10496 Glycine-rich cell wall structural protein 1.8 | 278 | 4e-024 |
| P05790 Fibroin heavy chain | 258 | 7e-022 |
| O18740 Keratin, type I cytoskeletal 9 | 251 | 5e-021 |
| Q6RHW0 Keratin, type I cytoskeletal 9 | 242 | 5e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O22791 Putative RNA-binding protein | 964 | 1e-102 |
| B9DHV1 AT2G33410 protein (Fragment) | 523 | 2e-051 |
| A3C5A6 Putative uncharacterized protein | 312 | 6e-027 |
| Q7XDV2 Transposon protein, putative, CACTA, En/Spm sub-class, expressed | 311 | 8e-027 |
| Q2QV63 Os12g0242100 protein | 310 | 1e-026 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G33410.1 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 965 | 7e-105 |
| AT4G14300.1 heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | 526 | 6e-054 |
| AT5G46730.2 glycine-rich protein | 277 | 4e-025 |
| AT5G46730.1 glycine-rich protein | 273 | 1e-024 |
| AT2G36120.1 DOT1 (DEFECTIVELY ORGANIZED TRIBUTARIES 1) | 263 | 2e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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