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Information for unigene UN57196

FASTA Sequence
Unigene ID: UN57196Length: 764 SSR 
GGGAGGACACAACCATCGTCCTCCTCCTCCTCCGTCTATCTTTCGTTTTCTGAGTAATCCGTTCTTCTTTGATTTGAATCTGAATC
AAACAAAACACGCGATCTCCAAGTCTGTATAAAAAAAATTGATCGAAAAGGCGTAAATCATCTAGCTACAAAGGGCATAGGACTCA
ACCATGGCTCCTGGAGGCAGTGCTTTGAAGGAAGTCCTTGAATCTAACTCAACAGGAATGGATTATGAGATCAAAACGACGAAAGT
AGAAGTTAACAACAGCAATAACAACAAACATACAAAGTCAGGTAGCGCAGGAATTGCAAAACATGGGATGCATTCCAACAATGGTG
TCTACGAGCTTCTTGAATGTCCAGTGTGTACAAACTTAATGTACCCTCCAATTCATCAGTGTCCAAACGGTCACACGTTATGCTCC
AACTGCAAAGCGAGAGTGCAGAACACGTGCCCCACGTGTCGCTACGAGCTTGGCAACATAAGATGCTTGGCGCTCGAGAAAGTCGC
AGAATCCTTGGAAGTTCCGTGCCGGTTCCAAAGTTTGGGATGTCACGACATTTTCCCCTACTACAGCAAGCTTAAGCACGAGCAGC
ATTGCAGTTTAGGCCTTACGCTTGCCCTTATGCTGGCTCTGAGTGTTCGGTTACAGGTGATATCTCCACACTGGTTGTTCATCTTA
AAGATGATCATAAAGTCGATATGCATGACGGGTGCACTTTCAACCACCGTTATGTGAAATCAAATCCACATGAAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876454 seven in absentia family protein [Arabidopsis lyrata subsp. lyrata]7214e-074
NP_191363 E3 ubiquitin-protein ligase SINAT2 [Arabidopsis thaliana]7062e-072
BAF01324 hypothetical protein [Arabidopsis thaliana]7062e-072
NP_181729 ubiquitin-protein ligase SIAH1 [Arabidopsis thaliana]6174e-062
XP_002881813 seven in absentia family protein [Arabidopsis lyrata subsp. lyrata]6122e-061

Swiss-Prot top hits (Blast detail)Scoree value
Q9M2P4 E3 ubiquitin-protein ligase SINAT27221e-075
P93748 Putative E3 ubiquitin-protein ligase SINAT16494e-067
Q84JL3 E3 ubiquitin-protein ligase SINAT34228e-041
Q8S3N1 E3 ubiquitin-protein ligase SINAT54155e-040
Q9STN8 E3 ubiquitin-protein ligase SINAT44083e-039

TrEMBL top hits (Blast detail)Scoree value
B9HA10 Predicted protein5592e-055
B9T806 Ubiquitin ligase SINAT2, putative5582e-055
Q9XGC3 SINA2p5351e-052
C6SZX8 Putative uncharacterized protein (Fragment)5304e-052
C6TM08 Putative uncharacterized protein5295e-052

Arabidopsis top hits (Blast detail)Scoree value
AT3G58040.1 SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2); protein binding / ubiquitin-protein ligase/ zinc ion binding7221e-076
AT2G41980.1 seven in absentia (SINA) family protein6494e-068
AT3G61790.1 seven in absentia (SINA) family protein4228e-042
AT4G27880.1 seven in absentia (SINA) family protein4083e-040
AT5G53360.1 seven in absentia (SINA) family protein2499e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members