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Information for unigene UN57420

FASTA Sequence
Unigene ID: UN57420Length: 608 SSR 
GAGGACAGAAGATGCCAAAGCTCAATGTGGAAGTCATCGATGAGCGGGGTCCACCAGACTCGAGACCTGAGAGCTGCCCTGTTGAG
AGAGTGTTCATATACCGAACAGTAGCGGGTCCTCGGTCTGACATGCCTGGCTTCGTTTGGAACATAACCAACAACACTCAACAATG
AGGTTTTCGGGGCAGATCATCACTACTAACGGATTATGACAAAACAAAAATTTAAACGAGGTTCATTCTTTCATTCAATCCTTGCT
CATCATCTCCCCATATAAATTGTTCCAGTTTAGGAACACGGGAGAGAGAGAGAGGGAGAGCTCGGTCTCCATTACCTTACTTCTGG
GCTGCTTCATATAAACACCAAGCTCATGAGCAACGAGTAAGAGAGGATAGAGATCTGAGAGACCTTTCTTTATAAGTATTGTTGTC
TGTTTGTTTGTATACTTGCTGAGAGATCTTGGTAGGGTGTTATTTTCTTAAGAGAATGATGATAAGCGATTTTTGTAAAAGACAAT
AGTGTCAAAATGTAACTGCTCTACGTGTTTTGGACTCATGTTTTTTATCATTTTCATTTGTCCGATTAGAGAAATGGCTGTTTGCA
GAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878489 hypothetical protein ARALYDRAFT_907876 [Arabidopsis lyrata subsp. lyrata]3215e-028
NP_567135 protein TRANSPORT INHIBITOR RESPONSE 1 [Arabidopsis thaliana]2571e-020
ADB92042 transport inhibitor response 1 [Arabidopsis thaliana]2571e-020
ADB92043 transport inhibitor response 1 [Arabidopsis thaliana]2571e-020
ADB92044 transport inhibitor response 1 [Arabidopsis thaliana]2571e-020

Swiss-Prot top hits (Blast detail)Scoree value
Q570C0 Protein TRANSPORT INHIBITOR RESPONSE 12577e-022
Q9ZR12 GRR1-like protein 12031e-015
Q0DKP3 Transport inhibitor response 1-like protein Os05g01505001304e-007

TrEMBL top hits (Blast detail)Scoree value
D3K008 Transport inhibitor response 1 (Fragment)2571e-020
D0ES26 Transport inhibitor response 12426e-019
B9I9W7 F-box family protein2401e-018
B9S3W2 TRANSPORT INHIBITOR RESPONSE 1 protein, putative2311e-017
B9IBT6 F-box family protein2292e-017

Arabidopsis top hits (Blast detail)Scoree value
AT3G62980.1 TIR1 (TRANSPORT INHIBITOR RESPONSE 1); auxin binding / protein binding / ubiquitin-protein ligase2577e-023
AT4G03190.1 GRH1 (GRR1-LIKE PROTEIN 1); auxin binding / protein binding / ubiquitin-protein ligase2031e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  100%

Unigene Members